Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 AL138724.1-201ENST00000606771 1088 ntBASIC20.26■□□□□ 0.83
RTL6Q6ICC9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RTL6Q6ICC9 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 AC026271.2-201ENST00000428091 497 ntBASIC20.25■□□□□ 0.83
RTL6Q6ICC9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 AC011298.3-201ENST00000615796 283 ntBASIC20.25■□□□□ 0.83
RTL6Q6ICC9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RTL6Q6ICC9 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 AC006455.2-201ENST00000429931 906 ntBASIC20.24■□□□□ 0.83
RTL6Q6ICC9 AC091305.1-201ENST00000479476 895 ntBASIC20.24■□□□□ 0.83
RTL6Q6ICC9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 AC241377.3-202ENST00000626088 1088 ntBASIC20.24■□□□□ 0.83
RTL6Q6ICC9 AC241585.3-202ENST00000628937 1088 ntBASIC20.24■□□□□ 0.83
RTL6Q6ICC9 AC245100.8-202ENST00000629247 1058 ntBASIC20.24■□□□□ 0.83
RTL6Q6ICC9 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RTL6Q6ICC9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL6Q6ICC9 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL6Q6ICC9 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL6Q6ICC9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL6Q6ICC9 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RTL6Q6ICC9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RTL6Q6ICC9 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 CA15P2-201ENST00000611168 834 ntBASIC20.21■□□□□ 0.83
RTL6Q6ICC9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 ALDH1A3-203ENST00000557963 1670 ntBASIC20.21■□□□□ 0.83
RTL6Q6ICC9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RTL6Q6ICC9 RASA4CP-201ENST00000424092 1398 ntBASIC20.21■□□□□ 0.83
RTL6Q6ICC9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.2■□□□□ 0.82
RTL6Q6ICC9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 MIR3181-201ENST00000578512 73 ntBASIC20.19■□□□□ 0.82
RTL6Q6ICC9 AC008764.7-201ENST00000593779 1081 ntBASIC20.19■□□□□ 0.82
RTL6Q6ICC9 AC136469.2-201ENST00000623944 1028 ntBASIC20.19■□□□□ 0.82
RTL6Q6ICC9 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
RTL6Q6ICC9 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms