Protein–RNA interactions for Protein: Q68CZ1

RPGRIP1L, Protein fantom, humanhuman

Predictions only

Length 1,315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1LQ68CZ1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
RPGRIP1LQ68CZ1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC32.27■■■□□ 2.76
RPGRIP1LQ68CZ1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.27■■■□□ 2.76
RPGRIP1LQ68CZ1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
RPGRIP1LQ68CZ1 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 DUX4L4-201ENST00000566884 1269 ntBASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
RPGRIP1LQ68CZ1 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
RPGRIP1LQ68CZ1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC32.26■■■□□ 2.75
RPGRIP1LQ68CZ1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC32.26■■■□□ 2.75
RPGRIP1LQ68CZ1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC32.26■■■□□ 2.75
RPGRIP1LQ68CZ1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
RPGRIP1LQ68CZ1 AL031602.1-201ENST00000633169 911 ntBASIC32.26■■■□□ 2.75
RPGRIP1LQ68CZ1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC32.25■■■□□ 2.75
RPGRIP1LQ68CZ1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
RPGRIP1LQ68CZ1 AC123595.1-201ENST00000440769 1046 ntBASIC32.25■■■□□ 2.75
RPGRIP1LQ68CZ1 OR2I1P-207ENST00000453522 948 ntBASIC32.25■■■□□ 2.75
RPGRIP1LQ68CZ1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 NME4-202ENST00000382940 766 ntTSL 3 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC32.24■■■□□ 2.75
RPGRIP1LQ68CZ1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
RPGRIP1LQ68CZ1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
RPGRIP1LQ68CZ1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RPGRIP1LQ68CZ1 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC32.23■■■□□ 2.75
RPGRIP1LQ68CZ1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC32.23■■■□□ 2.75
RPGRIP1LQ68CZ1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC32.23■■■□□ 2.75
RPGRIP1LQ68CZ1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
RPGRIP1LQ68CZ1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RPGRIP1LQ68CZ1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC32.21■■■□□ 2.75
RPGRIP1LQ68CZ1 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC32.21■■■□□ 2.75
RPGRIP1LQ68CZ1 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RPGRIP1LQ68CZ1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC32.21■■■□□ 2.75
RPGRIP1LQ68CZ1 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC32.2■■■□□ 2.75
RPGRIP1LQ68CZ1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
RPGRIP1LQ68CZ1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.2■■■□□ 2.75
RPGRIP1LQ68CZ1 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.74
RPGRIP1LQ68CZ1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 KRT18P5-201ENST00000436075 1291 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 AC012414.1-201ENST00000556676 535 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L2-201ENST00000561772 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L6-201ENST00000626483 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L1-201ENST00000627662 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L8-201ENST00000629013 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L3-201ENST00000630187 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L7-201ENST00000630678 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DUX4L5-201ENST00000630834 1275 ntBASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
RPGRIP1LQ68CZ1 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 AL354811.1-201ENST00000610286 706 ntBASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC32.18■■■□□ 2.74
RPGRIP1LQ68CZ1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC32.17■■■□□ 2.74
RPGRIP1LQ68CZ1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC32.17■■■□□ 2.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms