Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 AC126177.7-201ENST00000547904 679 ntBASIC21.2■□□□□ 0.98
LPCAT4Q643R3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.2■□□□□ 0.98
LPCAT4Q643R3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LPCAT4Q643R3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 AL161729.1-201ENST00000604104 1402 ntBASIC21.18■□□□□ 0.98
LPCAT4Q643R3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LPCAT4Q643R3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LPCAT4Q643R3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 PFN2-211ENST00000489155 636 ntTSL 4 BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.16■□□□□ 0.98
LPCAT4Q643R3 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.15■□□□□ 0.98
LPCAT4Q643R3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LPCAT4Q643R3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LPCAT4Q643R3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
LPCAT4Q643R3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 AC079630.1-202ENST00000618127 1840 ntBASIC21.13■□□□□ 0.97
LPCAT4Q643R3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LPCAT4Q643R3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LPCAT4Q643R3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms