Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 DUX4L19-201ENST00000557448 1267 ntBASIC19.87■□□□□ 0.77
FREM1Q5H8C1 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.87■□□□□ 0.77
FREM1Q5H8C1 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 SYT6-210ENST00000641643 1587 ntBASIC19.86■□□□□ 0.77
FREM1Q5H8C1 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 AL031432.3-201ENST00000607698 485 ntBASIC19.86■□□□□ 0.77
FREM1Q5H8C1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
FREM1Q5H8C1 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 AL139246.5-201ENST00000606645 996 ntBASIC19.85■□□□□ 0.77
FREM1Q5H8C1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
FREM1Q5H8C1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 UNC93B3-201ENST00000308076 687 ntBASIC19.84■□□□□ 0.77
FREM1Q5H8C1 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
FREM1Q5H8C1 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.83■□□□□ 0.77
FREM1Q5H8C1 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
FREM1Q5H8C1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.83■□□□□ 0.77
FREM1Q5H8C1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.83■□□□□ 0.77
FREM1Q5H8C1 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
FREM1Q5H8C1 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.83■□□□□ 0.76
FREM1Q5H8C1 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
FREM1Q5H8C1 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
FREM1Q5H8C1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.83■□□□□ 0.76
FREM1Q5H8C1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.83■□□□□ 0.76
FREM1Q5H8C1 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 AC135279.3-201ENST00000610945 1311 ntBASIC19.82■□□□□ 0.76
FREM1Q5H8C1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 AC241377.3-202ENST00000626088 1088 ntBASIC19.82■□□□□ 0.76
FREM1Q5H8C1 AC241585.3-202ENST00000628937 1088 ntBASIC19.82■□□□□ 0.76
FREM1Q5H8C1 AC245100.8-202ENST00000629247 1058 ntBASIC19.82■□□□□ 0.76
FREM1Q5H8C1 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
FREM1Q5H8C1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 AC144652.1-201ENST00000609974 1624 ntBASIC19.81■□□□□ 0.76
FREM1Q5H8C1 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 AC133561.4-201ENST00000566112 224 ntBASIC19.81■□□□□ 0.76
FREM1Q5H8C1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
FREM1Q5H8C1 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 AC011298.3-201ENST00000615796 283 ntBASIC19.8■□□□□ 0.76
FREM1Q5H8C1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
FREM1Q5H8C1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
FREM1Q5H8C1 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms