Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC25.91■■□□□ 1.74
USH1GQ495M9 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
USH1GQ495M9 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC25.91■■□□□ 1.74
USH1GQ495M9 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.91■■□□□ 1.74
USH1GQ495M9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USH1GQ495M9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
USH1GQ495M9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
USH1GQ495M9 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
USH1GQ495M9 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.9■■□□□ 1.74
USH1GQ495M9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
USH1GQ495M9 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
USH1GQ495M9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
USH1GQ495M9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
USH1GQ495M9 HES6-206ENST00000409574 738 ntTSL 2 BASIC25.9■■□□□ 1.74
USH1GQ495M9 AP001330.3-201ENST00000520123 633 ntBASIC25.9■■□□□ 1.74
USH1GQ495M9 AC011298.3-201ENST00000615796 283 ntBASIC25.9■■□□□ 1.74
USH1GQ495M9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC25.9■■□□□ 1.74
USH1GQ495M9 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
USH1GQ495M9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
USH1GQ495M9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
USH1GQ495M9 AL138724.1-201ENST00000606771 1088 ntBASIC25.89■■□□□ 1.74
USH1GQ495M9 pRNA.6-201ENST00000610482 90 ntBASIC25.89■■□□□ 1.74
USH1GQ495M9 pRNA.5-201ENST00000612139 90 ntBASIC25.89■■□□□ 1.74
USH1GQ495M9 pRNA.11-201ENST00000618423 90 ntBASIC25.89■■□□□ 1.74
USH1GQ495M9 pRNA.13-201ENST00000619112 90 ntBASIC25.89■■□□□ 1.74
USH1GQ495M9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
USH1GQ495M9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.73
USH1GQ495M9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC25.88■■□□□ 1.73
USH1GQ495M9 AL136967.2-201ENST00000623968 743 ntBASIC25.88■■□□□ 1.73
USH1GQ495M9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
USH1GQ495M9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.87■■□□□ 1.73
USH1GQ495M9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
USH1GQ495M9 ZNRF2P3-201ENST00000424200 374 ntBASIC25.87■■□□□ 1.73
USH1GQ495M9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.87■■□□□ 1.73
USH1GQ495M9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
USH1GQ495M9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
USH1GQ495M9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
USH1GQ495M9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.86■■□□□ 1.73
USH1GQ495M9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
USH1GQ495M9 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
USH1GQ495M9 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.86■■□□□ 1.73
USH1GQ495M9 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
USH1GQ495M9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.86■■□□□ 1.73
USH1GQ495M9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.86■■□□□ 1.73
USH1GQ495M9 MIR939-201ENST00000401314 82 ntBASIC25.86■■□□□ 1.73
USH1GQ495M9 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC25.86■■□□□ 1.73
USH1GQ495M9 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.86■■□□□ 1.73
USH1GQ495M9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC25.86■■□□□ 1.73
USH1GQ495M9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.86■■□□□ 1.73
USH1GQ495M9 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
USH1GQ495M9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.85■■□□□ 1.73
USH1GQ495M9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
USH1GQ495M9 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
USH1GQ495M9 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.85■■□□□ 1.73
USH1GQ495M9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.85■■□□□ 1.73
USH1GQ495M9 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.85■■□□□ 1.73
USH1GQ495M9 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC25.85■■□□□ 1.73
USH1GQ495M9 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC25.85■■□□□ 1.73
USH1GQ495M9 AC136469.2-201ENST00000623944 1028 ntBASIC25.85■■□□□ 1.73
USH1GQ495M9 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
USH1GQ495M9 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC25.85■■□□□ 1.73
USH1GQ495M9 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
USH1GQ495M9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC25.84■■□□□ 1.73
USH1GQ495M9 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
USH1GQ495M9 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USH1GQ495M9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USH1GQ495M9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USH1GQ495M9 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
USH1GQ495M9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
USH1GQ495M9 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.84■■□□□ 1.73
USH1GQ495M9 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.84■■□□□ 1.73
USH1GQ495M9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
USH1GQ495M9 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USH1GQ495M9 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
USH1GQ495M9 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
USH1GQ495M9 AC008764.7-201ENST00000593779 1081 ntBASIC25.83■■□□□ 1.73
USH1GQ495M9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
USH1GQ495M9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
USH1GQ495M9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
USH1GQ495M9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.72
USH1GQ495M9 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
USH1GQ495M9 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
USH1GQ495M9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
USH1GQ495M9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
USH1GQ495M9 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
USH1GQ495M9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.82■■□□□ 1.72
USH1GQ495M9 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.82■■□□□ 1.72
USH1GQ495M9 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
USH1GQ495M9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
USH1GQ495M9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC25.82■■□□□ 1.72
USH1GQ495M9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
USH1GQ495M9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
USH1GQ495M9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms