Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RASGEF1BQ0VAM2 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
RASGEF1BQ0VAM2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RASGEF1BQ0VAM2 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RASGEF1BQ0VAM2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.33■□□□□ 0.85
RASGEF1BQ0VAM2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RASGEF1BQ0VAM2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RASGEF1BQ0VAM2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 AL356740.2-201ENST00000601559 647 ntBASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 AL117332.1-201ENST00000622628 974 ntBASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RASGEF1BQ0VAM2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RASGEF1BQ0VAM2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RASGEF1BQ0VAM2 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 MIR3621-201ENST00000580529 85 ntBASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RASGEF1BQ0VAM2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.28■□□□□ 0.84
RASGEF1BQ0VAM2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RASGEF1BQ0VAM2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RASGEF1BQ0VAM2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
RASGEF1BQ0VAM2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RASGEF1BQ0VAM2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RASGEF1BQ0VAM2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.26■□□□□ 0.83
RASGEF1BQ0VAM2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RASGEF1BQ0VAM2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RASGEF1BQ0VAM2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms