Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 COA3YJL062W-A 258 nt3.89□□□□□ -1.79
RFU1Q08003 RAD27YKL113C 1149 nt3.89□□□□□ -1.79
RFU1Q08003 YPT53YNL093W 663 nt3.89□□□□□ -1.79
RFU1Q08003 UMP1YBR173C 447 nt3.89□□□□□ -1.79
RFU1Q08003 RSC3YDR303C 2658 nt3.89□□□□□ -1.79
RFU1Q08003 MSC2YDR205W 2175 nt3.89□□□□□ -1.79
RFU1Q08003 MET12YPL023C 1974 nt3.89□□□□□ -1.79
RFU1Q08003 TAF7YMR227C 1773 nt3.89□□□□□ -1.79
RFU1Q08003 LDB17YDL146W 1476 nt3.88□□□□□ -1.79
RFU1Q08003 RPP1AYDL081C 321 nt3.88□□□□□ -1.79
RFU1Q08003 GPP1YIL053W 753 nt3.88□□□□□ -1.79
RFU1Q08003 LSO1YJR005C-A 282 nt3.88□□□□□ -1.79
RFU1Q08003 YAL047W-AYAL047W-A 330 nt3.88□□□□□ -1.79
RFU1Q08003 ECM15YBL001C 315 nt3.88□□□□□ -1.79
RFU1Q08003 MGR2YPL098C 342 nt3.88□□□□□ -1.79
RFU1Q08003 PMT4YJR143C 2289 nt3.88□□□□□ -1.79
RFU1Q08003 VAC7YNL054W 3498 nt3.87□□□□□ -1.79
RFU1Q08003 ADP1YCR011C 3150 nt3.87□□□□□ -1.79
RFU1Q08003 YMR105W-AYMR105W-A 195 nt3.87□□□□□ -1.79
RFU1Q08003 YMR130WYMR130W 909 nt3.87□□□□□ -1.79
RFU1Q08003 OCA1YNL099C 717 nt3.87□□□□□ -1.79
RFU1Q08003 MRM1YOR201C 1239 nt3.87□□□□□ -1.79
RFU1Q08003 YBR141W-AYBR141W-A 96 nt3.87□□□□□ -1.79
RFU1Q08003 SPT23YKL020C 3249 nt3.87□□□□□ -1.79
RFU1Q08003 GAD1YMR250W 1758 nt3.86□□□□□ -1.79
RFU1Q08003 EGT2YNL327W 3126 nt3.86□□□□□ -1.79
RFU1Q08003 RNA15YGL044C 891 nt3.86□□□□□ -1.79
RFU1Q08003 YGL088WYGL088W 366 nt3.86□□□□□ -1.79
RFU1Q08003 NAT2YGR147C 867 nt3.86□□□□□ -1.79
RFU1Q08003 tS(AGA)D3tS(AGA)D3 83 nt3.86□□□□□ -1.79
RFU1Q08003 GVP36YIL041W 981 nt3.86□□□□□ -1.79
RFU1Q08003 CUS2YNL286W 858 nt3.86□□□□□ -1.79
RFU1Q08003 YNR042WYNR042W 429 nt3.86□□□□□ -1.79
RFU1Q08003 SLD7YOR060C 774 nt3.86□□□□□ -1.79
RFU1Q08003 UBA3YPR066W 900 nt3.86□□□□□ -1.79
RFU1Q08003 EAR1YMR171C 1653 nt3.86□□□□□ -1.79
RFU1Q08003 GPI18YBR004C 1302 nt3.86□□□□□ -1.79
RFU1Q08003 NUP2YLR335W 2163 nt3.86□□□□□ -1.79
RFU1Q08003 NOP58YOR310C 1536 nt3.85□□□□□ -1.79
RFU1Q08003 GUS1YGL245W 2127 nt3.85□□□□□ -1.79
RFU1Q08003 YDL012CYDL012C 324 nt3.85□□□□□ -1.79
RFU1Q08003 COX4YGL187C 468 nt3.85□□□□□ -1.79
RFU1Q08003 MHO1YJR008W 1017 nt3.85□□□□□ -1.79
RFU1Q08003 YKR104WYKR104W 921 nt3.85□□□□□ -1.79
RFU1Q08003 SWC7YLR385C 399 nt3.85□□□□□ -1.79
RFU1Q08003 YGP1YNL160W 1065 nt3.85□□□□□ -1.79
RFU1Q08003 PIM1YBL022C 3402 nt3.85□□□□□ -1.79
RFU1Q08003 GLN4YOR168W 2430 nt3.85□□□□□ -1.79
RFU1Q08003 FMP30YPL103C 1407 nt3.85□□□□□ -1.79
RFU1Q08003 YER077CYER077C 2067 nt3.85□□□□□ -1.79
RFU1Q08003 TOG1YER184C 2385 nt3.84□□□□□ -1.79
RFU1Q08003 IXR1YKL032C 1794 nt3.84□□□□□ -1.79
RFU1Q08003 snR7-SsnR7-S 179 nt3.84□□□□□ -1.79
RFU1Q08003 YGL188CYGL188C 174 nt3.84□□□□□ -1.79
RFU1Q08003 NMA1YLR328W 1206 nt3.84□□□□□ -1.79
RFU1Q08003 YMR010WYMR010W 1218 nt3.84□□□□□ -1.79
RFU1Q08003 CIN5YOR028C 888 nt3.84□□□□□ -1.79
RFU1Q08003 YPL114WYPL114W 420 nt3.84□□□□□ -1.79
RFU1Q08003 POP4YBR257W 840 nt3.84□□□□□ -1.79
RFU1Q08003 ARG4YHR018C 1392 nt3.84□□□□□ -1.79
RFU1Q08003 VHS3YOR054C 2025 nt3.83□□□□□ -1.8
RFU1Q08003 YCR006CYCR006C 474 nt3.83□□□□□ -1.8
RFU1Q08003 YER145C-AYER145C-A 438 nt3.83□□□□□ -1.8
RFU1Q08003 FAF1YIL019W 1041 nt3.83□□□□□ -1.8
RFU1Q08003 tX(XXX)DtX(XXX)D 100 nt3.83□□□□□ -1.8
RFU1Q08003 CYC1YJR048W 330 nt3.83□□□□□ -1.8
RFU1Q08003 YLR374CYLR374C 390 nt3.83□□□□□ -1.8
RFU1Q08003 URE2YNL229C 1065 nt3.83□□□□□ -1.8
RFU1Q08003 IDI1YPL117C 867 nt3.83□□□□□ -1.8
RFU1Q08003 ARC40YBR234C 1155 nt3.83□□□□□ -1.8
RFU1Q08003 YPK9YOR291W 4419 nt3.83□□□□□ -1.8
RFU1Q08003 NMD3YHR170W 1557 nt3.83□□□□□ -1.8
RFU1Q08003 VID28YIL017C 2766 nt3.83□□□□□ -1.8
RFU1Q08003 LCB2YDR062W 1686 nt3.82□□□□□ -1.8
RFU1Q08003 TDA6YPR157W 1404 nt3.82□□□□□ -1.8
RFU1Q08003 YLF2YHL014C 1218 nt3.82□□□□□ -1.8
RFU1Q08003 YIL165CYIL165C 360 nt3.82□□□□□ -1.8
RFU1Q08003 KRE9YJL174W 831 nt3.82□□□□□ -1.8
RFU1Q08003 SET6YPL165C 1122 nt3.82□□□□□ -1.8
RFU1Q08003 TYW1YPL207W 2433 nt3.82□□□□□ -1.8
RFU1Q08003 UBP6YFR010W 1500 nt3.81□□□□□ -1.8
RFU1Q08003 ZPR1YGR211W 1461 nt3.81□□□□□ -1.8
RFU1Q08003 ISR1YPR106W 1332 nt3.81□□□□□ -1.8
RFU1Q08003 SPR6YER115C 576 nt3.81□□□□□ -1.8
RFU1Q08003 YHR214WYHR214W 612 nt3.81□□□□□ -1.8
RFU1Q08003 YIL171W-AYIL171W-A 453 nt3.81□□□□□ -1.8
RFU1Q08003 YJL218WYJL218W 591 nt3.81□□□□□ -1.8
RFU1Q08003 YJL220WYJL220W 453 nt3.81□□□□□ -1.8
RFU1Q08003 UBI4YLL039C 1146 nt3.81□□□□□ -1.8
RFU1Q08003 YAR066WYAR066W 612 nt3.81□□□□□ -1.8
RFU1Q08003 DIT1YDR403W 1611 nt3.81□□□□□ -1.8
RFU1Q08003 ATG18YFR021W 1503 nt3.8□□□□□ -1.8
RFU1Q08003 UPC2YDR213W 2742 nt3.8□□□□□ -1.8
RFU1Q08003 PER1YCR044C 1074 nt3.8□□□□□ -1.8
RFU1Q08003 YCR075W-AYCR075W-A 228 nt3.8□□□□□ -1.8
RFU1Q08003 NUP42YDR192C 1293 nt3.8□□□□□ -1.8
RFU1Q08003 HSP31YDR533C 714 nt3.8□□□□□ -1.8
RFU1Q08003 YEL053W-AYEL053W-A 348 nt3.8□□□□□ -1.8
RFU1Q08003 CIA2YHR122W 696 nt3.8□□□□□ -1.8
RFU1Q08003 YIR017W-AYIR017W-A 600 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms