Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AL050303.2-201ENST00000619798 666 ntBASIC31.04■■■□□ 2.56
COL16A1Q07092 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL16A1Q07092 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC31.04■■■□□ 2.56
COL16A1Q07092 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC31.04■■■□□ 2.56
COL16A1Q07092 AC004854.2-201ENST00000608450 1441 ntBASIC31.04■■■□□ 2.56
COL16A1Q07092 AP004607.4-201ENST00000530158 1459 ntBASIC31.04■■■□□ 2.56
COL16A1Q07092 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
COL16A1Q07092 AC091060.1-201ENST00000623524 1766 ntBASIC31.03■■■□□ 2.56
COL16A1Q07092 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
COL16A1Q07092 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC31.03■■■□□ 2.56
COL16A1Q07092 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC31.03■■■□□ 2.56
COL16A1Q07092 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.03■■■□□ 2.56
COL16A1Q07092 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC31.03■■■□□ 2.56
COL16A1Q07092 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL16A1Q07092 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
COL16A1Q07092 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
COL16A1Q07092 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC31.02■■■□□ 2.56
COL16A1Q07092 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC31.02■■■□□ 2.56
COL16A1Q07092 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC31.02■■■□□ 2.56
COL16A1Q07092 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC31.02■■■□□ 2.56
COL16A1Q07092 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC31.02■■■□□ 2.56
COL16A1Q07092 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.02■■■□□ 2.56
COL16A1Q07092 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC31.02■■■□□ 2.56
COL16A1Q07092 OR2I1P-207ENST00000453522 948 ntBASIC31.02■■■□□ 2.56
COL16A1Q07092 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
COL16A1Q07092 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC31.02■■■□□ 2.56
COL16A1Q07092 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL16A1Q07092 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
COL16A1Q07092 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
COL16A1Q07092 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
COL16A1Q07092 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.01■■■□□ 2.55
COL16A1Q07092 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC31.01■■■□□ 2.55
COL16A1Q07092 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC31.01■■■□□ 2.55
COL16A1Q07092 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
COL16A1Q07092 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31■■■□□ 2.55
COL16A1Q07092 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31■■■□□ 2.55
COL16A1Q07092 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC31■■■□□ 2.55
COL16A1Q07092 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC31■■■□□ 2.55
COL16A1Q07092 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC31■■■□□ 2.55
COL16A1Q07092 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC30.99■■■□□ 2.55
COL16A1Q07092 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC30.99■■■□□ 2.55
COL16A1Q07092 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
COL16A1Q07092 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
COL16A1Q07092 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC30.98■■■□□ 2.55
COL16A1Q07092 SHD-204ENST00000599689 1729 ntTSL 5 BASIC30.98■■■□□ 2.55
COL16A1Q07092 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL16A1Q07092 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
COL16A1Q07092 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
COL16A1Q07092 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
COL16A1Q07092 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL16A1Q07092 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL16A1Q07092 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC30.97■■■□□ 2.55
COL16A1Q07092 METTL26-203ENST00000397664 604 ntTSL 2 BASIC30.97■■■□□ 2.55
COL16A1Q07092 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC30.97■■■□□ 2.55
COL16A1Q07092 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
COL16A1Q07092 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
COL16A1Q07092 AC141586.4-201ENST00000624558 1573 ntBASIC30.96■■■□□ 2.55
COL16A1Q07092 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
COL16A1Q07092 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC30.96■■■□□ 2.55
COL16A1Q07092 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
COL16A1Q07092 COX20-201ENST00000366528 568 ntTSL 2 BASIC30.95■■■□□ 2.55
COL16A1Q07092 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC30.95■■■□□ 2.55
COL16A1Q07092 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.95■■■□□ 2.55
COL16A1Q07092 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
COL16A1Q07092 AC133637.1-201ENST00000624115 1537 ntBASIC30.95■■■□□ 2.55
COL16A1Q07092 USF2-207ENST00000595068 1612 ntTSL 5 BASIC30.95■■■□□ 2.54
COL16A1Q07092 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
COL16A1Q07092 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
COL16A1Q07092 SLC7A5P2-201ENST00000553010 536 ntBASIC30.95■■■□□ 2.54
COL16A1Q07092 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
COL16A1Q07092 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC30.94■■■□□ 2.54
COL16A1Q07092 AL022069.1-201ENST00000568025 1636 ntBASIC30.94■■■□□ 2.54
COL16A1Q07092 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
COL16A1Q07092 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC30.94■■■□□ 2.54
COL16A1Q07092 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
COL16A1Q07092 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
COL16A1Q07092 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL16A1Q07092 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL16A1Q07092 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC30.94■■■□□ 2.54
COL16A1Q07092 AC008687.6-201ENST00000596318 630 ntBASIC30.94■■■□□ 2.54
COL16A1Q07092 AC105233.4-201ENST00000642045 216 ntBASIC30.94■■■□□ 2.54
COL16A1Q07092 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30.94■■■□□ 2.54
COL16A1Q07092 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC30.93■■■□□ 2.54
COL16A1Q07092 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL16A1Q07092 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.93■■■□□ 2.54
COL16A1Q07092 SHF-208ENST00000560734 1731 ntTSL 3 BASIC30.93■■■□□ 2.54
COL16A1Q07092 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
COL16A1Q07092 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC30.92■■■□□ 2.54
COL16A1Q07092 ARL16-209ENST00000573715 763 ntTSL 3 BASIC30.92■■■□□ 2.54
COL16A1Q07092 ARL16-211ENST00000576135 694 ntTSL 3 BASIC30.92■■■□□ 2.54
COL16A1Q07092 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL16A1Q07092 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.92■■■□□ 2.54
COL16A1Q07092 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
COL16A1Q07092 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL16A1Q07092 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL16A1Q07092 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
COL16A1Q07092 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL16A1Q07092 KLF13-207ENST00000560473 489 ntTSL 3 BASIC30.91■■■□□ 2.54
COL16A1Q07092 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
COL16A1Q07092 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC30.91■■■□□ 2.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms