Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
RPS27AP62979 AC131274.2-201ENST00000580697 1507 ntBASIC19.3■□□□□ 0.68
RPS27AP62979 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
RPS27AP62979 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS27AP62979 ALDH1A3-203ENST00000557963 1670 ntBASIC19.3■□□□□ 0.68
RPS27AP62979 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.3■□□□□ 0.68
RPS27AP62979 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS27AP62979 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS27AP62979 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
RPS27AP62979 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.3■□□□□ 0.68
RPS27AP62979 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
RPS27AP62979 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.3■□□□□ 0.68
RPS27AP62979 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS27AP62979 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
RPS27AP62979 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RPS27AP62979 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS27AP62979 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS27AP62979 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.29■□□□□ 0.68
RPS27AP62979 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS27AP62979 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RPS27AP62979 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.29■□□□□ 0.68
RPS27AP62979 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RPS27AP62979 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
RPS27AP62979 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS27AP62979 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.28■□□□□ 0.68
RPS27AP62979 AC127496.7-201ENST00000625110 1798 ntBASIC19.28■□□□□ 0.68
RPS27AP62979 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
RPS27AP62979 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS27AP62979 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RPS27AP62979 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS27AP62979 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.28■□□□□ 0.68
RPS27AP62979 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RPS27AP62979 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RPS27AP62979 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS27AP62979 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.27■□□□□ 0.68
RPS27AP62979 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.27■□□□□ 0.68
RPS27AP62979 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RPS27AP62979 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RPS27AP62979 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RPS27AP62979 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RPS27AP62979 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
RPS27AP62979 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPS27AP62979 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RPS27AP62979 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RPS27AP62979 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.27■□□□□ 0.67
RPS27AP62979 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
RPS27AP62979 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
RPS27AP62979 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS27AP62979 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
RPS27AP62979 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS27AP62979 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS27AP62979 AC129492.7-201ENST00000622992 756 ntBASIC19.26■□□□□ 0.67
RPS27AP62979 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RPS27AP62979 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.25■□□□□ 0.67
RPS27AP62979 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.25■□□□□ 0.67
RPS27AP62979 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RPS27AP62979 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RPS27AP62979 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.24■□□□□ 0.67
RPS27AP62979 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RPS27AP62979 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS27AP62979 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
RPS27AP62979 U85056.1-201ENST00000616429 682 ntBASIC19.24■□□□□ 0.67
RPS27AP62979 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS27AP62979 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS27AP62979 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS27AP62979 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.24■□□□□ 0.67
RPS27AP62979 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RPS27AP62979 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS27AP62979 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
RPS27AP62979 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RPS27AP62979 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS27AP62979 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
RPS27AP62979 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS27AP62979 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
RPS27AP62979 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS27AP62979 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RPS27AP62979 LINC00526-201ENST00000581067 1875 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms