Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC19.52■□□□□ 0.72
SEC61A1P61619 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.52■□□□□ 0.72
SEC61A1P61619 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.72
SEC61A1P61619 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.52■□□□□ 0.72
SEC61A1P61619 KRT125P-201ENST00000546827 989 ntBASIC19.52■□□□□ 0.72
SEC61A1P61619 AC011551.1-201ENST00000614101 683 ntBASIC19.52■□□□□ 0.72
SEC61A1P61619 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SEC61A1P61619 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
SEC61A1P61619 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEC61A1P61619 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
SEC61A1P61619 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SEC61A1P61619 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A1P61619 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.51■□□□□ 0.71
SEC61A1P61619 AC137630.3-201ENST00000607245 391 ntBASIC19.51■□□□□ 0.71
SEC61A1P61619 MIR4787-201ENST00000607364 84 ntBASIC19.51■□□□□ 0.71
SEC61A1P61619 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.51■□□□□ 0.71
SEC61A1P61619 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A1P61619 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A1P61619 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.51■□□□□ 0.71
SEC61A1P61619 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SEC61A1P61619 C1orf229-201ENST00000623686 2258 ntBASIC19.5■□□□□ 0.71
SEC61A1P61619 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A1P61619 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
SEC61A1P61619 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A1P61619 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A1P61619 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A1P61619 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.5■□□□□ 0.71
SEC61A1P61619 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SEC61A1P61619 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.49■□□□□ 0.71
SEC61A1P61619 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.49■□□□□ 0.71
SEC61A1P61619 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SEC61A1P61619 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SEC61A1P61619 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.49■□□□□ 0.71
SEC61A1P61619 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.49■□□□□ 0.71
SEC61A1P61619 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SEC61A1P61619 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A1P61619 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A1P61619 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
SEC61A1P61619 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A1P61619 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
SEC61A1P61619 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.48■□□□□ 0.71
SEC61A1P61619 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.48■□□□□ 0.71
SEC61A1P61619 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.48■□□□□ 0.71
SEC61A1P61619 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.48■□□□□ 0.71
SEC61A1P61619 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.48■□□□□ 0.71
SEC61A1P61619 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.48■□□□□ 0.71
SEC61A1P61619 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.48■□□□□ 0.71
SEC61A1P61619 AC137767.1-201ENST00000602918 1920 ntBASIC19.48■□□□□ 0.71
SEC61A1P61619 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A1P61619 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SEC61A1P61619 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.48■□□□□ 0.71
SEC61A1P61619 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A1P61619 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A1P61619 AC021242.3-201ENST00000607598 1377 ntBASIC19.47■□□□□ 0.71
SEC61A1P61619 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A1P61619 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.47■□□□□ 0.71
SEC61A1P61619 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A1P61619 AL356441.2-201ENST00000443009 864 ntBASIC19.47■□□□□ 0.71
SEC61A1P61619 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.47■□□□□ 0.71
SEC61A1P61619 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.47■□□□□ 0.71
SEC61A1P61619 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A1P61619 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SEC61A1P61619 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.47■□□□□ 0.71
SEC61A1P61619 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.46■□□□□ 0.71
SEC61A1P61619 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SEC61A1P61619 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.45■□□□□ 0.7
SEC61A1P61619 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A1P61619 AC090877.2-201ENST00000558441 1738 ntBASIC19.45■□□□□ 0.7
SEC61A1P61619 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A1P61619 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SEC61A1P61619 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.45■□□□□ 0.7
SEC61A1P61619 UNC93B8-201ENST00000511903 705 ntBASIC19.45■□□□□ 0.7
SEC61A1P61619 AC131212.1-201ENST00000613771 668 ntBASIC19.45■□□□□ 0.7
SEC61A1P61619 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SEC61A1P61619 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms