Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS3AP61247 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.91■□□□□ 0.94
RPS3AP61247 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.91■□□□□ 0.94
RPS3AP61247 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.91■□□□□ 0.94
RPS3AP61247 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
RPS3AP61247 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS3AP61247 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
RPS3AP61247 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
RPS3AP61247 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC20.9■□□□□ 0.94
RPS3AP61247 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS3AP61247 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS3AP61247 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS3AP61247 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.9■□□□□ 0.94
RPS3AP61247 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS3AP61247 MIR6089-201ENST00000616698 64 ntBASIC20.9■□□□□ 0.94
RPS3AP61247 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS3AP61247 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.9■□□□□ 0.94
RPS3AP61247 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RPS3AP61247 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RPS3AP61247 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.89■□□□□ 0.94
RPS3AP61247 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.89■□□□□ 0.94
RPS3AP61247 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.89■□□□□ 0.94
RPS3AP61247 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
RPS3AP61247 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.89■□□□□ 0.93
RPS3AP61247 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
RPS3AP61247 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS3AP61247 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
RPS3AP61247 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS3AP61247 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS3AP61247 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
RPS3AP61247 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
RPS3AP61247 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
RPS3AP61247 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
RPS3AP61247 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.87■□□□□ 0.93
RPS3AP61247 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
RPS3AP61247 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
RPS3AP61247 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.87■□□□□ 0.93
RPS3AP61247 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.87■□□□□ 0.93
RPS3AP61247 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.86■□□□□ 0.93
RPS3AP61247 AF131216.4-201ENST00000638924 1588 ntBASIC20.86■□□□□ 0.93
RPS3AP61247 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS3AP61247 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.86■□□□□ 0.93
RPS3AP61247 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.86■□□□□ 0.93
RPS3AP61247 AC092028.1-203ENST00000608262 953 ntBASIC20.86■□□□□ 0.93
RPS3AP61247 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.86■□□□□ 0.93
RPS3AP61247 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
RPS3AP61247 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.85■□□□□ 0.93
RPS3AP61247 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.85■□□□□ 0.93
RPS3AP61247 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.85■□□□□ 0.93
RPS3AP61247 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.85■□□□□ 0.93
RPS3AP61247 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.85■□□□□ 0.93
RPS3AP61247 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.85■□□□□ 0.93
RPS3AP61247 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.85■□□□□ 0.93
RPS3AP61247 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.85■□□□□ 0.93
RPS3AP61247 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RPS3AP61247 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
RPS3AP61247 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS3AP61247 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RPS3AP61247 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RPS3AP61247 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.83■□□□□ 0.93
RPS3AP61247 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPS3AP61247 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS3AP61247 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS3AP61247 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RPS3AP61247 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.83■□□□□ 0.93
RPS3AP61247 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.83■□□□□ 0.93
RPS3AP61247 TSPY9P-201ENST00000440215 945 ntBASIC20.83■□□□□ 0.93
RPS3AP61247 TSPY11P-201ENST00000442607 1045 ntBASIC20.83■□□□□ 0.93
RPS3AP61247 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.83■□□□□ 0.93
RPS3AP61247 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
RPS3AP61247 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RPS3AP61247 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RPS3AP61247 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS3AP61247 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS3AP61247 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RPS3AP61247 AC137767.1-201ENST00000602918 1920 ntBASIC20.82■□□□□ 0.92
RPS3AP61247 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS3AP61247 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS3AP61247 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RPS3AP61247 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.82■□□□□ 0.92
RPS3AP61247 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.82■□□□□ 0.92
RPS3AP61247 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.82■□□□□ 0.92
RPS3AP61247 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.82■□□□□ 0.92
RPS3AP61247 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RPS3AP61247 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.82■□□□□ 0.92
RPS3AP61247 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms