Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CXCR4P61073 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.51■□□□□ 0.87
CXCR4P61073 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CXCR4P61073 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.51■□□□□ 0.87
CXCR4P61073 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CXCR4P61073 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.5■□□□□ 0.87
CXCR4P61073 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CXCR4P61073 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CXCR4P61073 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.5■□□□□ 0.87
CXCR4P61073 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CXCR4P61073 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 AC139530.1-201ENST00000575312 1977 ntBASIC20.5■□□□□ 0.87
CXCR4P61073 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CXCR4P61073 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CXCR4P61073 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.5■□□□□ 0.87
CXCR4P61073 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.49■□□□□ 0.87
CXCR4P61073 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CXCR4P61073 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.49■□□□□ 0.87
CXCR4P61073 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CXCR4P61073 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
CXCR4P61073 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CXCR4P61073 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.48■□□□□ 0.87
CXCR4P61073 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.48■□□□□ 0.87
CXCR4P61073 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.48■□□□□ 0.87
CXCR4P61073 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CXCR4P61073 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXCR4P61073 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.47■□□□□ 0.87
CXCR4P61073 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CXCR4P61073 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.47■□□□□ 0.87
CXCR4P61073 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CXCR4P61073 AC009831.1-201ENST00000580420 1582 ntBASIC20.46■□□□□ 0.87
CXCR4P61073 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
CXCR4P61073 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXCR4P61073 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXCR4P61073 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
CXCR4P61073 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.46■□□□□ 0.87
CXCR4P61073 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CXCR4P61073 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CXCR4P61073 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.46■□□□□ 0.87
CXCR4P61073 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.46■□□□□ 0.87
CXCR4P61073 MIR4449-201ENST00000578365 66 ntBASIC20.46■□□□□ 0.87
CXCR4P61073 AC133552.2-201ENST00000619106 1032 ntBASIC20.46■□□□□ 0.87
CXCR4P61073 AC090877.2-201ENST00000558441 1738 ntBASIC20.46■□□□□ 0.87
CXCR4P61073 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CXCR4P61073 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.46■□□□□ 0.87
CXCR4P61073 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CXCR4P61073 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.45■□□□□ 0.86
CXCR4P61073 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.45■□□□□ 0.86
CXCR4P61073 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CXCR4P61073 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
CXCR4P61073 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.45■□□□□ 0.86
CXCR4P61073 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CXCR4P61073 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.44■□□□□ 0.86
CXCR4P61073 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.44■□□□□ 0.86
CXCR4P61073 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CXCR4P61073 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CXCR4P61073 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.44■□□□□ 0.86
CXCR4P61073 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CXCR4P61073 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
CXCR4P61073 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms