Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42P60953 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42P60953 AL592295.1-201ENST00000400984 884 ntBASIC20.54■□□□□ 0.88
CDC42P60953 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42P60953 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42P60953 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDC42P60953 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
CDC42P60953 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDC42P60953 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.53■□□□□ 0.88
CDC42P60953 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42P60953 RPS2P7-201ENST00000447334 885 ntBASIC20.53■□□□□ 0.88
CDC42P60953 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.53■□□□□ 0.88
CDC42P60953 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDC42P60953 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CDC42P60953 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDC42P60953 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.52■□□□□ 0.88
CDC42P60953 MIR639-201ENST00000384974 98 ntBASIC20.52■□□□□ 0.88
CDC42P60953 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CDC42P60953 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDC42P60953 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.52■□□□□ 0.87
CDC42P60953 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CDC42P60953 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.51■□□□□ 0.87
CDC42P60953 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDC42P60953 ALDH1A3-203ENST00000557963 1670 ntBASIC20.51■□□□□ 0.87
CDC42P60953 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42P60953 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42P60953 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.5■□□□□ 0.87
CDC42P60953 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.5■□□□□ 0.87
CDC42P60953 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42P60953 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC20.5■□□□□ 0.87
CDC42P60953 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42P60953 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDC42P60953 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.49■□□□□ 0.87
CDC42P60953 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.49■□□□□ 0.87
CDC42P60953 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CDC42P60953 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CDC42P60953 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
CDC42P60953 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.49■□□□□ 0.87
CDC42P60953 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDC42P60953 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDC42P60953 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42P60953 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDC42P60953 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CDC42P60953 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.48■□□□□ 0.87
CDC42P60953 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42P60953 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDC42P60953 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42P60953 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42P60953 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CDC42P60953 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42P60953 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42P60953 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42P60953 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDC42P60953 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDC42P60953 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
CDC42P60953 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 AC007375.3-201ENST00000600936 2314 ntBASIC20.46■□□□□ 0.87
CDC42P60953 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.46■□□□□ 0.87
CDC42P60953 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CDC42P60953 AC133552.2-201ENST00000619106 1032 ntBASIC20.46■□□□□ 0.87
CDC42P60953 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CDC42P60953 AC009831.1-201ENST00000580420 1582 ntBASIC20.46■□□□□ 0.87
CDC42P60953 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.45■□□□□ 0.86
CDC42P60953 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CDC42P60953 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms