Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
CLCNKAP51800 SYT6-210ENST00000641643 1587 ntBASIC22.06■■□□□ 1.12
CLCNKAP51800 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.06■■□□□ 1.12
CLCNKAP51800 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CLCNKAP51800 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.06■■□□□ 1.12
CLCNKAP51800 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
CLCNKAP51800 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
CLCNKAP51800 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.05■■□□□ 1.12
CLCNKAP51800 PBX2P1-201ENST00000493219 1291 ntBASIC22.05■■□□□ 1.12
CLCNKAP51800 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.05■■□□□ 1.12
CLCNKAP51800 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.05■■□□□ 1.12
CLCNKAP51800 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
CLCNKAP51800 AC019069.1-201ENST00000610008 1333 ntBASIC22.05■■□□□ 1.12
CLCNKAP51800 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
CLCNKAP51800 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCNKAP51800 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCNKAP51800 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCNKAP51800 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CLCNKAP51800 AC135279.3-201ENST00000610945 1311 ntBASIC22.04■■□□□ 1.12
CLCNKAP51800 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CLCNKAP51800 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.03■■□□□ 1.12
CLCNKAP51800 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.03■■□□□ 1.12
CLCNKAP51800 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CLCNKAP51800 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCNKAP51800 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.02■■□□□ 1.12
CLCNKAP51800 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 SERBP1P1-201ENST00000396021 1160 ntBASIC22.02■■□□□ 1.12
CLCNKAP51800 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 AC024257.2-201ENST00000549699 147 ntBASIC22.02■■□□□ 1.12
CLCNKAP51800 AC005837.3-201ENST00000612163 286 ntBASIC22.02■■□□□ 1.12
CLCNKAP51800 AC011298.3-201ENST00000615796 283 ntBASIC22.02■■□□□ 1.12
CLCNKAP51800 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CLCNKAP51800 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLCNKAP51800 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
CLCNKAP51800 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CLCNKAP51800 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
CLCNKAP51800 FP325331.1-202ENST00000623531 1380 ntBASIC22.01■■□□□ 1.11
CLCNKAP51800 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CLCNKAP51800 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CLCNKAP51800 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.01■■□□□ 1.11
CLCNKAP51800 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 AC009086.3-201ENST00000623486 1008 ntBASIC22.01■■□□□ 1.11
CLCNKAP51800 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
CLCNKAP51800 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.01■■□□□ 1.11
CLCNKAP51800 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CLCNKAP51800 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 EDA-201ENST00000338901 1233 ntBASIC22■■□□□ 1.11
CLCNKAP51800 PTCHD3P2-201ENST00000424937 1205 ntBASIC22■■□□□ 1.11
CLCNKAP51800 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
CLCNKAP51800 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC22■■□□□ 1.11
CLCNKAP51800 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22■■□□□ 1.11
CLCNKAP51800 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 AC093323.1-202ENST00000635031 2045 ntBASIC22■■□□□ 1.11
CLCNKAP51800 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CLCNKAP51800 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CLCNKAP51800 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.99■■□□□ 1.11
CLCNKAP51800 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
CLCNKAP51800 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCNKAP51800 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCNKAP51800 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCNKAP51800 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.99■■□□□ 1.11
CLCNKAP51800 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CLCNKAP51800 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.99■■□□□ 1.11
CLCNKAP51800 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CLCNKAP51800 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.98■■□□□ 1.11
CLCNKAP51800 AL031432.3-201ENST00000607698 485 ntBASIC21.98■■□□□ 1.11
CLCNKAP51800 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CLCNKAP51800 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.98■■□□□ 1.11
CLCNKAP51800 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms