Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF144AP50876 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
RNF144AP50876 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF144AP50876 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF144AP50876 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF144AP50876 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF144AP50876 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.84■□□□□ 0.93
RNF144AP50876 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.84■□□□□ 0.93
RNF144AP50876 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF144AP50876 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF144AP50876 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF144AP50876 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF144AP50876 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF144AP50876 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF144AP50876 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF144AP50876 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
RNF144AP50876 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
RNF144AP50876 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.83■□□□□ 0.93
RNF144AP50876 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF144AP50876 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF144AP50876 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF144AP50876 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF144AP50876 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF144AP50876 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF144AP50876 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
RNF144AP50876 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF144AP50876 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF144AP50876 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.82■□□□□ 0.92
RNF144AP50876 Z92544.1-202ENST00000571933 1220 ntBASIC20.82■□□□□ 0.92
RNF144AP50876 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF144AP50876 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF144AP50876 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF144AP50876 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF144AP50876 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF144AP50876 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF144AP50876 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF144AP50876 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.81■□□□□ 0.92
RNF144AP50876 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF144AP50876 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF144AP50876 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF144AP50876 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF144AP50876 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF144AP50876 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF144AP50876 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF144AP50876 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.8■□□□□ 0.92
RNF144AP50876 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF144AP50876 MTDHP2-201ENST00000601468 714 ntBASIC20.8■□□□□ 0.92
RNF144AP50876 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF144AP50876 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF144AP50876 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF144AP50876 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF144AP50876 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
RNF144AP50876 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
RNF144AP50876 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF144AP50876 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF144AP50876 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF144AP50876 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF144AP50876 UNC93B8-201ENST00000511903 705 ntBASIC20.79■□□□□ 0.92
RNF144AP50876 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF144AP50876 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF144AP50876 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF144AP50876 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF144AP50876 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF144AP50876 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF144AP50876 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF144AP50876 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF144AP50876 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF144AP50876 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RNF144AP50876 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF144AP50876 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF144AP50876 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF144AP50876 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF144AP50876 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF144AP50876 AC079630.1-202ENST00000618127 1840 ntBASIC20.77■□□□□ 0.92
RNF144AP50876 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF144AP50876 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF144AP50876 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF144AP50876 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF144AP50876 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF144AP50876 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF144AP50876 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF144AP50876 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF144AP50876 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF144AP50876 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF144AP50876 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF144AP50876 AC010997.5-201ENST00000609182 354 ntBASIC20.76■□□□□ 0.91
RNF144AP50876 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF144AP50876 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF144AP50876 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms