Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PRIM2P49643 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRIM2P49643 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.29■■□□□ 1
PRIM2P49643 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PRIM2P49643 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PRIM2P49643 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
PRIM2P49643 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRIM2P49643 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.29■■□□□ 1
PRIM2P49643 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PRIM2P49643 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.28■■□□□ 1
PRIM2P49643 ALDH1A3-203ENST00000557963 1670 ntBASIC21.28■■□□□ 1
PRIM2P49643 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.28■■□□□ 1
PRIM2P49643 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.28■■□□□ 1
PRIM2P49643 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PRIM2P49643 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PRIM2P49643 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PRIM2P49643 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 AC004448.1-201ENST00000458332 883 ntBASIC21.27■■□□□ 1
PRIM2P49643 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.27■■□□□ 1
PRIM2P49643 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.27■■□□□ 1
PRIM2P49643 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
PRIM2P49643 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PRIM2P49643 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PRIM2P49643 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRIM2P49643 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.26■□□□□ 0.99
PRIM2P49643 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.26■□□□□ 0.99
PRIM2P49643 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
PRIM2P49643 DUSP8P3-201ENST00000399571 1760 ntBASIC21.26■□□□□ 0.99
PRIM2P49643 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
PRIM2P49643 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PRIM2P49643 AC137630.3-201ENST00000607245 391 ntBASIC21.26■□□□□ 0.99
PRIM2P49643 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PRIM2P49643 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
PRIM2P49643 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRIM2P49643 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRIM2P49643 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRIM2P49643 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.25■□□□□ 0.99
PRIM2P49643 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.25■□□□□ 0.99
PRIM2P49643 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PRIM2P49643 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.25■□□□□ 0.99
PRIM2P49643 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PRIM2P49643 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PRIM2P49643 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
PRIM2P49643 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.24■□□□□ 0.99
PRIM2P49643 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.24■□□□□ 0.99
PRIM2P49643 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.24■□□□□ 0.99
PRIM2P49643 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.24■□□□□ 0.99
PRIM2P49643 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.24■□□□□ 0.99
PRIM2P49643 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PRIM2P49643 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.23■□□□□ 0.99
PRIM2P49643 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.23■□□□□ 0.99
PRIM2P49643 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 RARRES2P1-201ENST00000474487 481 ntBASIC21.23■□□□□ 0.99
PRIM2P49643 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PRIM2P49643 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
PRIM2P49643 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
PRIM2P49643 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.23■□□□□ 0.99
PRIM2P49643 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
PRIM2P49643 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.22■□□□□ 0.99
PRIM2P49643 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRIM2P49643 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRIM2P49643 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.22■□□□□ 0.99
PRIM2P49643 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.22■□□□□ 0.99
PRIM2P49643 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.22■□□□□ 0.99
PRIM2P49643 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
PRIM2P49643 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
PRIM2P49643 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRIM2P49643 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
PRIM2P49643 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
PRIM2P49643 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRIM2P49643 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.21■□□□□ 0.99
PRIM2P49643 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRIM2P49643 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
PRIM2P49643 BX664725.1-201ENST00000438252 379 ntBASIC21.21■□□□□ 0.99
PRIM2P49643 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PRIM2P49643 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms