Protein–RNA interactions for Protein: P47017

LSM1, Sm-like protein LSm1, yeastyeast

Known RBP Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM1P47017 SYN8YAL014C 768 nt4.02□□□□□ -1.77
LSM1P47017 RAD27YKL113C 1149 nt4.02□□□□□ -1.77
LSM1P47017 YAL047W-AYAL047W-A 330 nt4.02□□□□□ -1.77
LSM1P47017 AVO2YMR068W 1281 nt4.02□□□□□ -1.77
LSM1P47017 YPT53YNL093W 663 nt4.02□□□□□ -1.77
LSM1P47017 YPL025CYPL025C 558 nt4.02□□□□□ -1.77
LSM1P47017 YBR141W-AYBR141W-A 96 nt4.02□□□□□ -1.77
LSM1P47017 YCR023CYCR023C 1836 nt4.02□□□□□ -1.77
LSM1P47017 TYW1YPL207W 2433 nt4.02□□□□□ -1.77
LSM1P47017 SSH4YKL124W 1740 nt4.01□□□□□ -1.77
LSM1P47017 SAP4YGL229C 2457 nt4.01□□□□□ -1.77
LSM1P47017 ADP1YCR011C 3150 nt4.01□□□□□ -1.77
LSM1P47017 RAM1YDL090C 1296 nt4.01□□□□□ -1.77
LSM1P47017 RNA15YGL044C 891 nt4.01□□□□□ -1.77
LSM1P47017 OAR1YKL055C 837 nt4.01□□□□□ -1.77
LSM1P47017 FBP1YLR377C 1047 nt4.01□□□□□ -1.77
LSM1P47017 MAC1YMR021C 1254 nt4.01□□□□□ -1.77
LSM1P47017 YNL134CYNL134C 1131 nt4.01□□□□□ -1.77
LSM1P47017 SLZ1YNL196C 897 nt4.01□□□□□ -1.77
LSM1P47017 RCL1YOL010W 1104 nt4.01□□□□□ -1.77
LSM1P47017 DIT1YDR403W 1611 nt4.01□□□□□ -1.77
LSM1P47017 FAA1YOR317W 2103 nt4.01□□□□□ -1.77
LSM1P47017 AIM10YER087W 1731 nt4.01□□□□□ -1.77
LSM1P47017 CDC6YJL194W 1542 nt4□□□□□ -1.77
LSM1P47017 YJR015WYJR015W 1533 nt4□□□□□ -1.77
LSM1P47017 CDC14YFR028C 1656 nt4□□□□□ -1.77
LSM1P47017 APC4YDR118W 1959 nt4□□□□□ -1.77
LSM1P47017 CPR4YCR069W 957 nt4□□□□□ -1.77
LSM1P47017 YGL088WYGL088W 366 nt4□□□□□ -1.77
LSM1P47017 SYF2YGR129W 648 nt4□□□□□ -1.77
LSM1P47017 ADD66YKL206C 804 nt4□□□□□ -1.77
LSM1P47017 BUD28YLR062C 378 nt4□□□□□ -1.77
LSM1P47017 SWC7YLR385C 399 nt4□□□□□ -1.77
LSM1P47017 YMR130WYMR130W 909 nt4□□□□□ -1.77
LSM1P47017 YNL217WYNL217W 981 nt4□□□□□ -1.77
LSM1P47017 CKB2YOR039W 777 nt4□□□□□ -1.77
LSM1P47017 DBP3YGL078C 1572 nt4□□□□□ -1.77
LSM1P47017 DPB2YPR175W 2070 nt3.99□□□□□ -1.77
LSM1P47017 MSC2YDR205W 2175 nt3.99□□□□□ -1.77
LSM1P47017 RPS13YDR064W 456 nt3.99□□□□□ -1.77
LSM1P47017 CBT1YKL208W 816 nt3.99□□□□□ -1.77
LSM1P47017 YAR019W-AYAR019W-A 333 nt3.99□□□□□ -1.77
LSM1P47017 YOR034C-AYOR034C-A 243 nt3.99□□□□□ -1.77
LSM1P47017 SER1YOR184W 1188 nt3.99□□□□□ -1.77
LSM1P47017 NOC2YOR206W 2133 nt3.99□□□□□ -1.77
LSM1P47017 SMP1YBR182C 1359 nt3.99□□□□□ -1.77
LSM1P47017 SRO7YPR032W 3102 nt3.99□□□□□ -1.77
LSM1P47017 SER33YIL074C 1410 nt3.98□□□□□ -1.77
LSM1P47017 KNH1YDL049C 807 nt3.98□□□□□ -1.77
LSM1P47017 BNA6YFR047C 888 nt3.98□□□□□ -1.77
LSM1P47017 YGL194C-AYGL194C-A 243 nt3.98□□□□□ -1.77
LSM1P47017 PRE7YBL041W 726 nt3.98□□□□□ -1.77
LSM1P47017 SPS19YNL202W 879 nt3.98□□□□□ -1.77
LSM1P47017 BBP1YPL255W 1158 nt3.98□□□□□ -1.77
LSM1P47017 snR3snR3 194 nt3.98□□□□□ -1.77
LSM1P47017 UBP6YFR010W 1500 nt3.98□□□□□ -1.77
LSM1P47017 PIM1YBL022C 3402 nt3.98□□□□□ -1.77
LSM1P47017 MRE11YMR224C 2079 nt3.98□□□□□ -1.77
LSM1P47017 SPT23YKL020C 3249 nt3.97□□□□□ -1.77
LSM1P47017 APC1YNL172W 5247 nt3.97□□□□□ -1.77
LSM1P47017 OSH2YDL019C 3852 nt3.97□□□□□ -1.77
LSM1P47017 TRK1YJL129C 3708 nt3.97□□□□□ -1.77
LSM1P47017 YDL172CYDL172C 480 nt3.97□□□□□ -1.77
LSM1P47017 MLC1YGL106W 450 nt3.97□□□□□ -1.77
LSM1P47017 YNG2YHR090C 849 nt3.97□□□□□ -1.77
LSM1P47017 REV7YIL139C 738 nt3.97□□□□□ -1.77
LSM1P47017 SRP40YKR092C 1221 nt3.97□□□□□ -1.77
LSM1P47017 YAR030CYAR030C 342 nt3.97□□□□□ -1.77
LSM1P47017 TOM40YMR203W 1164 nt3.97□□□□□ -1.77
LSM1P47017 ZPR1YGR211W 1461 nt3.97□□□□□ -1.77
LSM1P47017 YDR056CYDR056C 618 nt3.96□□□□□ -1.78
LSM1P47017 SNA2YDR525W-A 240 nt3.96□□□□□ -1.78
LSM1P47017 YGL188CYGL188C 174 nt3.96□□□□□ -1.78
LSM1P47017 YGR066CYGR066C 879 nt3.96□□□□□ -1.78
LSM1P47017 PRE9YGR135W 777 nt3.96□□□□□ -1.78
LSM1P47017 RTA1YGR213C 954 nt3.96□□□□□ -1.78
LSM1P47017 GVP36YIL041W 981 nt3.96□□□□□ -1.78
LSM1P47017 APS1YLR170C 471 nt3.96□□□□□ -1.78
LSM1P47017 GTR1YML121W 933 nt3.96□□□□□ -1.78
LSM1P47017 YOR292CYOR292C 930 nt3.96□□□□□ -1.78
LSM1P47017 PRP9YDL030W 1593 nt3.96□□□□□ -1.78
LSM1P47017 RAD52YML032C 1416 nt3.95□□□□□ -1.78
LSM1P47017 RPO31YOR116C 4383 nt3.95□□□□□ -1.78
LSM1P47017 TRF5YNL299W 1929 nt3.95□□□□□ -1.78
LSM1P47017 SYP1YCR030C 2613 nt3.95□□□□□ -1.78
LSM1P47017 snR7-LsnR7-L 214 nt3.95□□□□□ -1.78
LSM1P47017 HSP42YDR171W 1128 nt3.95□□□□□ -1.78
LSM1P47017 DCD1YHR144C 939 nt3.95□□□□□ -1.78
LSM1P47017 IRC9YJL142C 393 nt3.95□□□□□ -1.78
LSM1P47017 ATP14YLR295C 375 nt3.95□□□□□ -1.78
LSM1P47017 HAL1YPR005C 885 nt3.95□□□□□ -1.78
LSM1P47017 YCF1YDR135C 4548 nt3.94□□□□□ -1.78
LSM1P47017 LAP3YNL239W 1365 nt3.94□□□□□ -1.78
LSM1P47017 ARG82YDR173C 1068 nt3.94□□□□□ -1.78
LSM1P47017 REX4YOL080C 870 nt3.94□□□□□ -1.78
LSM1P47017 ATG2YNL242W 4779 nt3.94□□□□□ -1.78
LSM1P47017 RPG1YBR079C 2895 nt3.93□□□□□ -1.78
LSM1P47017 VPS45YGL095C 1734 nt3.93□□□□□ -1.78
LSM1P47017 YAP1802YGR241C 1707 nt3.93□□□□□ -1.78
LSM1P47017 SPI1YER150W 447 nt3.93□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms