Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LMO1P25800 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LMO1P25800 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.92■□□□□ 0.62
LMO1P25800 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LMO1P25800 Z92544.1-202ENST00000571933 1220 ntBASIC18.92■□□□□ 0.62
LMO1P25800 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.92■□□□□ 0.62
LMO1P25800 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.92■□□□□ 0.62
LMO1P25800 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
LMO1P25800 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LMO1P25800 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LMO1P25800 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LMO1P25800 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LMO1P25800 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.91■□□□□ 0.62
LMO1P25800 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.91■□□□□ 0.62
LMO1P25800 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.91■□□□□ 0.62
LMO1P25800 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LMO1P25800 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LMO1P25800 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC18.91■□□□□ 0.62
LMO1P25800 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.91■□□□□ 0.62
LMO1P25800 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LMO1P25800 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
LMO1P25800 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO1P25800 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO1P25800 RARRES2P1-201ENST00000474487 481 ntBASIC18.9■□□□□ 0.62
LMO1P25800 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.9■□□□□ 0.62
LMO1P25800 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.9■□□□□ 0.62
LMO1P25800 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.9■□□□□ 0.62
LMO1P25800 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO1P25800 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
LMO1P25800 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
LMO1P25800 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO1P25800 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LMO1P25800 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
LMO1P25800 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
LMO1P25800 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.89■□□□□ 0.62
LMO1P25800 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
LMO1P25800 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
LMO1P25800 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO1P25800 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
LMO1P25800 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO1P25800 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.89■□□□□ 0.61
LMO1P25800 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.89■□□□□ 0.61
LMO1P25800 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
LMO1P25800 C9orf163-202ENST00000624034 2573 ntBASIC18.89■□□□□ 0.61
LMO1P25800 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO1P25800 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LMO1P25800 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.89■□□□□ 0.61
LMO1P25800 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.89■□□□□ 0.61
LMO1P25800 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.89■□□□□ 0.61
LMO1P25800 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.88■□□□□ 0.61
LMO1P25800 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
LMO1P25800 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
LMO1P25800 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO1P25800 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
LMO1P25800 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LMO1P25800 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
LMO1P25800 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
LMO1P25800 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.87■□□□□ 0.61
LMO1P25800 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
LMO1P25800 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.87■□□□□ 0.61
LMO1P25800 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
LMO1P25800 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.87■□□□□ 0.61
LMO1P25800 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.87■□□□□ 0.61
LMO1P25800 AC092028.1-203ENST00000608262 953 ntBASIC18.87■□□□□ 0.61
LMO1P25800 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
LMO1P25800 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
LMO1P25800 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.86■□□□□ 0.61
LMO1P25800 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO1P25800 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO1P25800 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
LMO1P25800 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
LMO1P25800 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
LMO1P25800 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.86■□□□□ 0.61
LMO1P25800 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.86■□□□□ 0.61
LMO1P25800 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LMO1P25800 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
LMO1P25800 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LMO1P25800 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO1P25800 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.85■□□□□ 0.61
LMO1P25800 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LMO1P25800 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.85■□□□□ 0.61
LMO1P25800 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
LMO1P25800 KRT125P-201ENST00000546827 989 ntBASIC18.85■□□□□ 0.61
LMO1P25800 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC18.85■□□□□ 0.61
LMO1P25800 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
LMO1P25800 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
LMO1P25800 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
LMO1P25800 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms