Protein–RNA interactions for Protein: P25105

PTAFR, Platelet-activating factor receptor, humanhuman

Predictions only

Length 342 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTAFRP25105 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
PTAFRP25105 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PTAFRP25105 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PTAFRP25105 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PTAFRP25105 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
PTAFRP25105 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTAFRP25105 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTAFRP25105 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
PTAFRP25105 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC19.68■□□□□ 0.74
PTAFRP25105 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.68■□□□□ 0.74
PTAFRP25105 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
PTAFRP25105 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.68■□□□□ 0.74
PTAFRP25105 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
PTAFRP25105 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PTAFRP25105 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
PTAFRP25105 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTAFRP25105 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTAFRP25105 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.67■□□□□ 0.74
PTAFRP25105 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTAFRP25105 AC009102.2-201ENST00000606772 1639 ntBASIC19.67■□□□□ 0.74
PTAFRP25105 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTAFRP25105 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
PTAFRP25105 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
PTAFRP25105 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.67■□□□□ 0.74
PTAFRP25105 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
PTAFRP25105 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.67■□□□□ 0.74
PTAFRP25105 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
PTAFRP25105 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.67■□□□□ 0.74
PTAFRP25105 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
PTAFRP25105 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 UNC93B3-201ENST00000308076 687 ntBASIC19.66■□□□□ 0.74
PTAFRP25105 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
PTAFRP25105 PBX2P1-201ENST00000493219 1291 ntBASIC19.66■□□□□ 0.74
PTAFRP25105 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 AC106739.1-201ENST00000617035 715 ntBASIC19.66■□□□□ 0.74
PTAFRP25105 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PTAFRP25105 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.66■□□□□ 0.74
PTAFRP25105 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
PTAFRP25105 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.65■□□□□ 0.74
PTAFRP25105 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTAFRP25105 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.65■□□□□ 0.74
PTAFRP25105 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
PTAFRP25105 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.65■□□□□ 0.74
PTAFRP25105 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PTAFRP25105 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTAFRP25105 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.65■□□□□ 0.74
PTAFRP25105 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTAFRP25105 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PTAFRP25105 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PTAFRP25105 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PTAFRP25105 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
PTAFRP25105 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTAFRP25105 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
PTAFRP25105 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 AL136162.1-201ENST00000607711 1078 ntBASIC19.64■□□□□ 0.73
PTAFRP25105 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.64■□□□□ 0.73
PTAFRP25105 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.64■□□□□ 0.73
PTAFRP25105 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PTAFRP25105 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.64■□□□□ 0.73
PTAFRP25105 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTAFRP25105 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PTAFRP25105 SYT6-210ENST00000641643 1587 ntBASIC19.63■□□□□ 0.73
PTAFRP25105 AC135279.3-201ENST00000610945 1311 ntBASIC19.63■□□□□ 0.73
PTAFRP25105 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.63■□□□□ 0.73
PTAFRP25105 AC005837.3-201ENST00000612163 286 ntBASIC19.63■□□□□ 0.73
PTAFRP25105 AC241377.3-202ENST00000626088 1088 ntBASIC19.63■□□□□ 0.73
PTAFRP25105 AC241585.3-202ENST00000628937 1088 ntBASIC19.63■□□□□ 0.73
PTAFRP25105 AC245100.8-202ENST00000629247 1058 ntBASIC19.63■□□□□ 0.73
PTAFRP25105 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTAFRP25105 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTAFRP25105 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
PTAFRP25105 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PTAFRP25105 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTAFRP25105 C17orf82-201ENST00000623772 1530 ntBASIC19.62■□□□□ 0.73
PTAFRP25105 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PTAFRP25105 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
PTAFRP25105 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.62■□□□□ 0.73
PTAFRP25105 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTAFRP25105 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTAFRP25105 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTAFRP25105 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PTAFRP25105 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.62■□□□□ 0.73
PTAFRP25105 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.62■□□□□ 0.73
PTAFRP25105 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.61■□□□□ 0.73
PTAFRP25105 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTAFRP25105 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PTAFRP25105 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
PTAFRP25105 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PTAFRP25105 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC19.61■□□□□ 0.73
PTAFRP25105 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms