Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CHMP24386 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP24386 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
CHMP24386 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP24386 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
CHMP24386 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.94■□□□□ 0.94
CHMP24386 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.94■□□□□ 0.94
CHMP24386 UNC93B8-201ENST00000511903 705 ntBASIC20.94■□□□□ 0.94
CHMP24386 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CHMP24386 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP24386 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP24386 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP24386 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP24386 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP24386 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP24386 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP24386 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP24386 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP24386 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.93■□□□□ 0.94
CHMP24386 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHMP24386 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CHMP24386 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.92■□□□□ 0.94
CHMP24386 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP24386 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP24386 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHMP24386 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHMP24386 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CHMP24386 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP24386 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
CHMP24386 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.92■□□□□ 0.94
CHMP24386 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP24386 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP24386 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
CHMP24386 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 TSPY9P-201ENST00000440215 945 ntBASIC20.91■□□□□ 0.94
CHMP24386 TSPY11P-201ENST00000442607 1045 ntBASIC20.91■□□□□ 0.94
CHMP24386 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.91■□□□□ 0.94
CHMP24386 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP24386 AC131212.1-201ENST00000613771 668 ntBASIC20.91■□□□□ 0.94
CHMP24386 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHMP24386 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP24386 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP24386 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP24386 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CHMP24386 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP24386 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP24386 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP24386 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP24386 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP24386 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP24386 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CHMP24386 KRT16P3-201ENST00000439127 1283 ntBASIC20.9■□□□□ 0.94
CHMP24386 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP24386 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP24386 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP24386 DUSP8P3-201ENST00000399571 1760 ntBASIC20.9■□□□□ 0.94
CHMP24386 AC092068.2-201ENST00000590491 1708 ntBASIC20.9■□□□□ 0.94
CHMP24386 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CHMP24386 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.89■□□□□ 0.94
CHMP24386 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP24386 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP24386 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP24386 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CHMP24386 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP24386 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP24386 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP24386 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP24386 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.89■□□□□ 0.93
CHMP24386 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP24386 EP400NL-214ENST00000641289 2402 ntBASIC20.89■□□□□ 0.93
CHMP24386 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP24386 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP24386 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP24386 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP24386 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP24386 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 MTDHP2-201ENST00000601468 714 ntBASIC20.88■□□□□ 0.93
CHMP24386 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP24386 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP24386 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP24386 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP24386 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms