Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC24.06■■□□□ 1.44
TNFAIP3P21580 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.06■■□□□ 1.44
TNFAIP3P21580 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.06■■□□□ 1.44
TNFAIP3P21580 SNX5-217ENST00000606557 1087 ntBASIC24.06■■□□□ 1.44
TNFAIP3P21580 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFAIP3P21580 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
TNFAIP3P21580 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
TNFAIP3P21580 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
TNFAIP3P21580 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC24.05■■□□□ 1.44
TNFAIP3P21580 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TNFAIP3P21580 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFAIP3P21580 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFAIP3P21580 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNFAIP3P21580 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFAIP3P21580 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFAIP3P21580 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.05■■□□□ 1.44
TNFAIP3P21580 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNFAIP3P21580 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
TNFAIP3P21580 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.05■■□□□ 1.44
TNFAIP3P21580 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.05■■□□□ 1.44
TNFAIP3P21580 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TNFAIP3P21580 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNFAIP3P21580 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TNFAIP3P21580 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TNFAIP3P21580 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.04■■□□□ 1.44
TNFAIP3P21580 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.04■■□□□ 1.44
TNFAIP3P21580 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.04■■□□□ 1.44
TNFAIP3P21580 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC24.04■■□□□ 1.44
TNFAIP3P21580 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 SENP5-202ENST00000419026 973 ntTSL 3 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC24.03■■□□□ 1.44
TNFAIP3P21580 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNFAIP3P21580 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TNFAIP3P21580 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TNFAIP3P21580 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TNFAIP3P21580 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TNFAIP3P21580 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TNFAIP3P21580 C1orf229-201ENST00000623686 2258 ntBASIC24.01■■□□□ 1.43
TNFAIP3P21580 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TNFAIP3P21580 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
TNFAIP3P21580 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TNFAIP3P21580 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TNFAIP3P21580 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TNFAIP3P21580 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TNFAIP3P21580 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC24■■□□□ 1.43
TNFAIP3P21580 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TNFAIP3P21580 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TNFAIP3P21580 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNFAIP3P21580 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNFAIP3P21580 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
TNFAIP3P21580 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.99■■□□□ 1.43
TNFAIP3P21580 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.99■■□□□ 1.43
TNFAIP3P21580 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TNFAIP3P21580 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNFAIP3P21580 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TNFAIP3P21580 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNFAIP3P21580 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TNFAIP3P21580 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TNFAIP3P21580 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNFAIP3P21580 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC23.98■■□□□ 1.43
TNFAIP3P21580 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.98■■□□□ 1.43
TNFAIP3P21580 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
TNFAIP3P21580 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TNFAIP3P21580 AC233723.2-201ENST00000623798 2106 ntBASIC23.98■■□□□ 1.43
TNFAIP3P21580 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNFAIP3P21580 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNFAIP3P21580 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.97■■□□□ 1.43
TNFAIP3P21580 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TNFAIP3P21580 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNFAIP3P21580 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
TNFAIP3P21580 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC23.97■■□□□ 1.43
TNFAIP3P21580 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNFAIP3P21580 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNFAIP3P21580 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms