Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.62■□□□□ 0.73
SRMP19623 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRMP19623 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRMP19623 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SRMP19623 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SRMP19623 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SRMP19623 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
SRMP19623 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.62■□□□□ 0.73
SRMP19623 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
SRMP19623 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.62■□□□□ 0.73
SRMP19623 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRMP19623 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRMP19623 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SRMP19623 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.61■□□□□ 0.73
SRMP19623 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC19.61■□□□□ 0.73
SRMP19623 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.61■□□□□ 0.73
SRMP19623 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SRMP19623 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.61■□□□□ 0.73
SRMP19623 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.6■□□□□ 0.73
SRMP19623 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRMP19623 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SRMP19623 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.6■□□□□ 0.73
SRMP19623 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.6■□□□□ 0.73
SRMP19623 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRMP19623 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SRMP19623 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SRMP19623 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.6■□□□□ 0.73
SRMP19623 AC131274.2-201ENST00000580697 1507 ntBASIC19.6■□□□□ 0.73
SRMP19623 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SRMP19623 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRMP19623 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SRMP19623 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
SRMP19623 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.59■□□□□ 0.73
SRMP19623 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.59■□□□□ 0.73
SRMP19623 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SRMP19623 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRMP19623 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRMP19623 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRMP19623 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SRMP19623 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SRMP19623 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.58■□□□□ 0.72
SRMP19623 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.58■□□□□ 0.72
SRMP19623 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRMP19623 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRMP19623 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SRMP19623 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SRMP19623 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.58■□□□□ 0.72
SRMP19623 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.58■□□□□ 0.72
SRMP19623 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SRMP19623 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.57■□□□□ 0.72
SRMP19623 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRMP19623 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRMP19623 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC19.57■□□□□ 0.72
SRMP19623 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRMP19623 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SRMP19623 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRMP19623 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SRMP19623 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SRMP19623 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.57■□□□□ 0.72
SRMP19623 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.56■□□□□ 0.72
SRMP19623 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.56■□□□□ 0.72
SRMP19623 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SRMP19623 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.56■□□□□ 0.72
SRMP19623 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
SRMP19623 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 SPCS2P3-201ENST00000500401 656 ntBASIC19.56■□□□□ 0.72
SRMP19623 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
SRMP19623 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.56■□□□□ 0.72
SRMP19623 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.56■□□□□ 0.72
SRMP19623 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.56■□□□□ 0.72
SRMP19623 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.56■□□□□ 0.72
SRMP19623 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SRMP19623 AC079630.1-202ENST00000618127 1840 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms