Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.57■□□□□ 0.4
CD28P10747 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC17.57■□□□□ 0.4
CD28P10747 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.57■□□□□ 0.4
CD28P10747 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.57■□□□□ 0.4
CD28P10747 AP003733.4-201ENST00000623785 1697 ntBASIC17.57■□□□□ 0.4
CD28P10747 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD28P10747 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CD28P10747 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CD28P10747 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CD28P10747 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17.56■□□□□ 0.4
CD28P10747 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 AC233992.3-201ENST00000607491 485 ntBASIC17.56■□□□□ 0.4
CD28P10747 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.56■□□□□ 0.4
CD28P10747 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CD28P10747 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 TMEM202-AS1-202ENST00000565181 2325 ntBASIC17.55■□□□□ 0.4
CD28P10747 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.55■□□□□ 0.4
CD28P10747 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 IRS3P-201ENST00000223076 1006 ntBASIC17.55■□□□□ 0.4
CD28P10747 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC17.55■□□□□ 0.4
CD28P10747 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC17.55■□□□□ 0.4
CD28P10747 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CD28P10747 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CD28P10747 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.54■□□□□ 0.4
CD28P10747 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.54■□□□□ 0.4
CD28P10747 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CD28P10747 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CD28P10747 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.54■□□□□ 0.4
CD28P10747 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.53■□□□□ 0.4
CD28P10747 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CD28P10747 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC17.53■□□□□ 0.4
CD28P10747 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD28P10747 BX842568.3-201ENST00000418104 571 ntBASIC17.53■□□□□ 0.4
CD28P10747 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CD28P10747 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.53■□□□□ 0.4
CD28P10747 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.53■□□□□ 0.4
CD28P10747 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD28P10747 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD28P10747 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD28P10747 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CD28P10747 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CD28P10747 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD28P10747 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD28P10747 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD28P10747 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CD28P10747 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17.52■□□□□ 0.4
CD28P10747 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.52■□□□□ 0.4
CD28P10747 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC17.52■□□□□ 0.4
CD28P10747 MIR6821-201ENST00000617625 74 ntBASIC17.52■□□□□ 0.4
CD28P10747 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD28P10747 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CD28P10747 AC141586.4-201ENST00000624558 1573 ntBASIC17.52■□□□□ 0.39
CD28P10747 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC17.52■□□□□ 0.39
CD28P10747 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD28P10747 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.52■□□□□ 0.39
CD28P10747 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CD28P10747 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CD28P10747 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 AC097381.1-201ENST00000429019 1296 ntBASIC17.51■□□□□ 0.39
CD28P10747 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC17.51■□□□□ 0.39
CD28P10747 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 AC104564.3-201ENST00000582367 638 ntBASIC17.51■□□□□ 0.39
CD28P10747 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CD28P10747 AC087623.3-201ENST00000607047 1098 ntBASIC17.51■□□□□ 0.39
CD28P10747 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.51■□□□□ 0.39
CD28P10747 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.51■□□□□ 0.39
CD28P10747 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CD28P10747 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CD28P10747 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.51■□□□□ 0.39
CD28P10747 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD28P10747 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD28P10747 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CD28P10747 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CD28P10747 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms