Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 DLX3-202ENST00000512495 834 ntTSL 2 BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC30.13■■■□□ 2.41
CSB-PGBD3P0DP91 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 CCDC92B-201ENST00000575506 885 ntBASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 AL354811.1-201ENST00000610286 706 ntBASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC30.12■■■□□ 2.41
CSB-PGBD3P0DP91 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC30.11■■■□□ 2.41
CSB-PGBD3P0DP91 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CSB-PGBD3P0DP91 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CSB-PGBD3P0DP91 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
CSB-PGBD3P0DP91 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
CSB-PGBD3P0DP91 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.1■■■□□ 2.41
CSB-PGBD3P0DP91 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC30.1■■■□□ 2.41
CSB-PGBD3P0DP91 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CSB-PGBD3P0DP91 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC30.09■■■□□ 2.41
CSB-PGBD3P0DP91 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CSB-PGBD3P0DP91 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
CSB-PGBD3P0DP91 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
CSB-PGBD3P0DP91 AC133637.1-201ENST00000624115 1537 ntBASIC30.09■■■□□ 2.41
CSB-PGBD3P0DP91 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 NTF6G-201ENST00000591094 616 ntBASIC30.08■■■□□ 2.41
CSB-PGBD3P0DP91 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.41
CSB-PGBD3P0DP91 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.07■■■□□ 2.4
CSB-PGBD3P0DP91 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC30.06■■■□□ 2.4
CSB-PGBD3P0DP91 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CSB-PGBD3P0DP91 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
CSB-PGBD3P0DP91 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
CSB-PGBD3P0DP91 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
CSB-PGBD3P0DP91 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC30.06■■■□□ 2.4
CSB-PGBD3P0DP91 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC30.05■■■□□ 2.4
CSB-PGBD3P0DP91 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC30.05■■■□□ 2.4
CSB-PGBD3P0DP91 EI24-204ENST00000527235 1625 ntTSL 5 BASIC30.05■■■□□ 2.4
CSB-PGBD3P0DP91 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC30.05■■■□□ 2.4
CSB-PGBD3P0DP91 KRT18P14-201ENST00000534205 1250 ntBASIC30.05■■■□□ 2.4
CSB-PGBD3P0DP91 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 ID1-201ENST00000376105 1233 ntBASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 AC010525.1-201ENST00000585559 441 ntBASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
CSB-PGBD3P0DP91 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 AC091060.1-201ENST00000623524 1766 ntBASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
CSB-PGBD3P0DP91 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
CSB-PGBD3P0DP91 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC30.01■■■□□ 2.4
CSB-PGBD3P0DP91 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC30.01■■■□□ 2.4
CSB-PGBD3P0DP91 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
CSB-PGBD3P0DP91 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC30.01■■■□□ 2.39
CSB-PGBD3P0DP91 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
CSB-PGBD3P0DP91 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC30.01■■■□□ 2.39
CSB-PGBD3P0DP91 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
CSB-PGBD3P0DP91 LINC02228-203ENST00000641970 1355 ntBASIC30.01■■■□□ 2.39
CSB-PGBD3P0DP91 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms