Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 AL391422.3-201ENST00000603791 2761 ntBASIC20.66■□□□□ 0.9
SMIM18P0DKX4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 AC007952.6-201ENST00000573168 2673 ntBASIC20.65■□□□□ 0.9
SMIM18P0DKX4 AC003957.1-201ENST00000625108 2673 ntBASIC20.65■□□□□ 0.9
SMIM18P0DKX4 AL157384.1-201ENST00000445995 2473 ntBASIC20.65■□□□□ 0.9
SMIM18P0DKX4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SMIM18P0DKX4 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM18P0DKX4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
SMIM18P0DKX4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SMIM18P0DKX4 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMIM18P0DKX4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.63■□□□□ 0.89
SMIM18P0DKX4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SMIM18P0DKX4 CIB2-204ENST00000557846 934 ntTSL 3 BASIC20.62■□□□□ 0.89
SMIM18P0DKX4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
SMIM18P0DKX4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM18P0DKX4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM18P0DKX4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMIM18P0DKX4 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 AC010542.4-201ENST00000563151 1910 ntBASIC20.61■□□□□ 0.89
SMIM18P0DKX4 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SMIM18P0DKX4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
SMIM18P0DKX4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 LINC01521-201ENST00000504184 1943 ntBASIC20.59■□□□□ 0.89
SMIM18P0DKX4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SMIM18P0DKX4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SMIM18P0DKX4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
SMIM18P0DKX4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
SMIM18P0DKX4 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SMIM18P0DKX4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
SMIM18P0DKX4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM18P0DKX4 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.57■□□□□ 0.88
SMIM18P0DKX4 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SMIM18P0DKX4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms