Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ERCC1P07992 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC1P07992 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC1P07992 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC1P07992 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ERCC1P07992 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ERCC1P07992 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC1P07992 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.8■□□□□ 0.76
ERCC1P07992 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.8■□□□□ 0.76
ERCC1P07992 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.8■□□□□ 0.76
ERCC1P07992 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC1P07992 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC1P07992 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.79■□□□□ 0.76
ERCC1P07992 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.79■□□□□ 0.76
ERCC1P07992 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC1P07992 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.79■□□□□ 0.76
ERCC1P07992 MIR6724-1-201ENST00000616420 92 ntBASIC19.79■□□□□ 0.76
ERCC1P07992 MIR6724-2-201ENST00000616483 92 ntBASIC19.79■□□□□ 0.76
ERCC1P07992 MIR6724-4-201ENST00000617390 92 ntBASIC19.79■□□□□ 0.76
ERCC1P07992 MIR6724-3-201ENST00000622482 92 ntBASIC19.79■□□□□ 0.76
ERCC1P07992 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.79■□□□□ 0.76
ERCC1P07992 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
ERCC1P07992 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.79■□□□□ 0.76
ERCC1P07992 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC1P07992 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ERCC1P07992 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC1P07992 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ERCC1P07992 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC1P07992 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ERCC1P07992 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.78■□□□□ 0.76
ERCC1P07992 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC1P07992 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
ERCC1P07992 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ERCC1P07992 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC1P07992 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC1P07992 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC1P07992 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
ERCC1P07992 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.78■□□□□ 0.76
ERCC1P07992 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC1P07992 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ERCC1P07992 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC1P07992 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.77■□□□□ 0.76
ERCC1P07992 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC1P07992 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC1P07992 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC1P07992 AL356740.2-201ENST00000601559 647 ntBASIC19.77■□□□□ 0.76
ERCC1P07992 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.77■□□□□ 0.76
ERCC1P07992 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.77■□□□□ 0.76
ERCC1P07992 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC1P07992 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.77■□□□□ 0.76
ERCC1P07992 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
ERCC1P07992 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.77■□□□□ 0.75
ERCC1P07992 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ERCC1P07992 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
ERCC1P07992 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
ERCC1P07992 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
ERCC1P07992 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.76■□□□□ 0.75
ERCC1P07992 AF131216.4-201ENST00000638924 1588 ntBASIC19.76■□□□□ 0.75
ERCC1P07992 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC1P07992 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ERCC1P07992 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.75■□□□□ 0.75
ERCC1P07992 ANOS2P-203ENST00000472227 1816 ntBASIC19.75■□□□□ 0.75
ERCC1P07992 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.75■□□□□ 0.75
ERCC1P07992 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC1P07992 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.75■□□□□ 0.75
ERCC1P07992 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.75■□□□□ 0.75
ERCC1P07992 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC1P07992 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
ERCC1P07992 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.75■□□□□ 0.75
ERCC1P07992 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC1P07992 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ERCC1P07992 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC1P07992 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms