Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTSBP07858 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.43■■□□□ 1.02
CTSBP07858 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.43■■□□□ 1.02
CTSBP07858 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.43■■□□□ 1.02
CTSBP07858 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTSBP07858 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.42■■□□□ 1.02
CTSBP07858 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTSBP07858 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.42■■□□□ 1.02
CTSBP07858 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTSBP07858 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTSBP07858 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CTSBP07858 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC21.42■■□□□ 1.02
CTSBP07858 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.42■■□□□ 1.02
CTSBP07858 AC133561.4-201ENST00000566112 224 ntBASIC21.42■■□□□ 1.02
CTSBP07858 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.42■■□□□ 1.02
CTSBP07858 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.42■■□□□ 1.02
CTSBP07858 AC009086.3-201ENST00000623486 1008 ntBASIC21.42■■□□□ 1.02
CTSBP07858 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CTSBP07858 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.41■■□□□ 1.02
CTSBP07858 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC21.41■■□□□ 1.02
CTSBP07858 MIR3181-201ENST00000578512 73 ntBASIC21.41■■□□□ 1.02
CTSBP07858 MIR4767-201ENST00000582827 78 ntBASIC21.41■■□□□ 1.02
CTSBP07858 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTSBP07858 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTSBP07858 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTSBP07858 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.4■■□□□ 1.02
CTSBP07858 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.4■■□□□ 1.02
CTSBP07858 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTSBP07858 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC21.4■■□□□ 1.02
CTSBP07858 SUDS3P1-201ENST00000505831 966 ntBASIC21.4■■□□□ 1.02
CTSBP07858 DUX4L19-201ENST00000557448 1267 ntBASIC21.4■■□□□ 1.02
CTSBP07858 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTSBP07858 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTSBP07858 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTSBP07858 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.39■■□□□ 1.02
CTSBP07858 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTSBP07858 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.39■■□□□ 1.01
CTSBP07858 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
CTSBP07858 pRNA.6-201ENST00000610482 90 ntBASIC21.39■■□□□ 1.01
CTSBP07858 pRNA.5-201ENST00000612139 90 ntBASIC21.39■■□□□ 1.01
CTSBP07858 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.39■■□□□ 1.01
CTSBP07858 pRNA.11-201ENST00000618423 90 ntBASIC21.39■■□□□ 1.01
CTSBP07858 pRNA.13-201ENST00000619112 90 ntBASIC21.39■■□□□ 1.01
CTSBP07858 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.39■■□□□ 1.01
CTSBP07858 AC241377.3-202ENST00000626088 1088 ntBASIC21.39■■□□□ 1.01
CTSBP07858 AC241585.3-202ENST00000628937 1088 ntBASIC21.39■■□□□ 1.01
CTSBP07858 AC245100.8-202ENST00000629247 1058 ntBASIC21.39■■□□□ 1.01
CTSBP07858 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
CTSBP07858 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSBP07858 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
CTSBP07858 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.38■■□□□ 1.01
CTSBP07858 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSBP07858 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSBP07858 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CTSBP07858 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.37■■□□□ 1.01
CTSBP07858 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.37■■□□□ 1.01
CTSBP07858 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.37■■□□□ 1.01
CTSBP07858 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSBP07858 GRAMD4P4-201ENST00000613563 1115 ntBASIC21.37■■□□□ 1.01
CTSBP07858 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.37■■□□□ 1.01
CTSBP07858 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSBP07858 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CTSBP07858 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.37■■□□□ 1.01
CTSBP07858 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CTSBP07858 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CTSBP07858 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 HES6-206ENST00000409574 738 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSBP07858 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSBP07858 AC142381.2-201ENST00000566120 298 ntBASIC21.36■■□□□ 1.01
CTSBP07858 AC092171.4-201ENST00000609130 632 ntBASIC21.36■■□□□ 1.01
CTSBP07858 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.36■■□□□ 1.01
CTSBP07858 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CTSBP07858 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CTSBP07858 AC093323.1-202ENST00000635031 2045 ntBASIC21.36■■□□□ 1.01
CTSBP07858 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTSBP07858 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CTSBP07858 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CTSBP07858 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CTSBP07858 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
CTSBP07858 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.35■■□□□ 1.01
CTSBP07858 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms