Protein–RNA interactions for Protein: P04628

WNT1, Proto-oncogene Wnt-1, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT1P04628 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT1P04628 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
WNT1P04628 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT1P04628 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT1P04628 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC22.22■■□□□ 1.15
WNT1P04628 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
WNT1P04628 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.22■■□□□ 1.15
WNT1P04628 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.22■■□□□ 1.15
WNT1P04628 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
WNT1P04628 AP003733.4-201ENST00000623785 1697 ntBASIC22.21■■□□□ 1.15
WNT1P04628 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT1P04628 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT1P04628 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.21■■□□□ 1.15
WNT1P04628 GLI3-203ENST00000437480 451 ntTSL 2 BASIC22.21■■□□□ 1.15
WNT1P04628 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.21■■□□□ 1.15
WNT1P04628 TSPY26P-201ENST00000476365 1326 ntBASIC22.21■■□□□ 1.15
WNT1P04628 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
WNT1P04628 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
WNT1P04628 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
WNT1P04628 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
WNT1P04628 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
WNT1P04628 AK1-201ENST00000223836 736 ntTSL 3 BASIC22.2■■□□□ 1.14
WNT1P04628 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT1P04628 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC22.2■■□□□ 1.14
WNT1P04628 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.2■■□□□ 1.14
WNT1P04628 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.2■■□□□ 1.14
WNT1P04628 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
WNT1P04628 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
WNT1P04628 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.14
WNT1P04628 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.2■■□□□ 1.14
WNT1P04628 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
WNT1P04628 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT1P04628 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.19■■□□□ 1.14
WNT1P04628 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.19■■□□□ 1.14
WNT1P04628 AL031602.1-201ENST00000633169 911 ntBASIC22.19■■□□□ 1.14
WNT1P04628 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT1P04628 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.19■■□□□ 1.14
WNT1P04628 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC22.19■■□□□ 1.14
WNT1P04628 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
WNT1P04628 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.18■■□□□ 1.14
WNT1P04628 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.18■■□□□ 1.14
WNT1P04628 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
WNT1P04628 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.18■■□□□ 1.14
WNT1P04628 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.18■■□□□ 1.14
WNT1P04628 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
WNT1P04628 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
WNT1P04628 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.17■■□□□ 1.14
WNT1P04628 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
WNT1P04628 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
WNT1P04628 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.17■■□□□ 1.14
WNT1P04628 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.17■■□□□ 1.14
WNT1P04628 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
WNT1P04628 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
WNT1P04628 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
WNT1P04628 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
WNT1P04628 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.16■■□□□ 1.14
WNT1P04628 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.16■■□□□ 1.14
WNT1P04628 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
WNT1P04628 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.16■■□□□ 1.14
WNT1P04628 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
WNT1P04628 AC133637.1-201ENST00000624115 1537 ntBASIC22.16■■□□□ 1.14
WNT1P04628 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.15■■□□□ 1.14
WNT1P04628 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
WNT1P04628 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.15■■□□□ 1.14
WNT1P04628 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
WNT1P04628 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
WNT1P04628 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
WNT1P04628 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
WNT1P04628 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
WNT1P04628 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
WNT1P04628 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
WNT1P04628 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC22.14■■□□□ 1.14
WNT1P04628 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
WNT1P04628 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.14
WNT1P04628 AC034268.1-201ENST00000441047 882 ntBASIC22.14■■□□□ 1.13
WNT1P04628 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC22.14■■□□□ 1.13
WNT1P04628 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
WNT1P04628 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
WNT1P04628 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
WNT1P04628 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC22.14■■□□□ 1.13
WNT1P04628 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
WNT1P04628 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
WNT1P04628 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC22.13■■□□□ 1.13
WNT1P04628 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
WNT1P04628 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms