Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.1■□□□□ 0.33
TCRAP04437 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.1■□□□□ 0.33
TCRAP04437 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TCRAP04437 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TCRAP04437 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TCRAP04437 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TCRAP04437 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TCRAP04437 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TCRAP04437 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRAP04437 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRAP04437 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRAP04437 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
TCRAP04437 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.08■□□□□ 0.33
TCRAP04437 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TCRAP04437 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 STK32C-205ENST00000456004 607 ntTSL 2 BASIC17.08■□□□□ 0.32
TCRAP04437 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TCRAP04437 AC018755.3-202ENST00000596210 929 ntBASIC17.08■□□□□ 0.32
TCRAP04437 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 AC007375.3-201ENST00000600936 2314 ntBASIC17.08■□□□□ 0.32
TCRAP04437 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
TCRAP04437 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TCRAP04437 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TCRAP04437 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TCRAP04437 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TCRAP04437 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.07■□□□□ 0.32
TCRAP04437 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRAP04437 AC087393.1-201ENST00000582896 145 ntBASIC17.07■□□□□ 0.32
TCRAP04437 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TCRAP04437 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.07■□□□□ 0.32
TCRAP04437 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TCRAP04437 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TCRAP04437 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRAP04437 MIR7108-201ENST00000614319 87 ntBASIC17.06■□□□□ 0.32
TCRAP04437 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRAP04437 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRAP04437 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.06■□□□□ 0.32
TCRAP04437 AC131274.2-201ENST00000580697 1507 ntBASIC17.06■□□□□ 0.32
TCRAP04437 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.06■□□□□ 0.32
TCRAP04437 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TCRAP04437 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 GPX1-201ENST00000419349 1106 ntBASIC17.05■□□□□ 0.32
TCRAP04437 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.05■□□□□ 0.32
TCRAP04437 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TCRAP04437 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRAP04437 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRAP04437 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TCRAP04437 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TCRAP04437 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.04■□□□□ 0.32
TCRAP04437 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms