Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.3□□□□□ -0.12
APOBP04114 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBP04114 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
APOBP04114 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC14.3□□□□□ -0.12
APOBP04114 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBP04114 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBP04114 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC14.3□□□□□ -0.12
APOBP04114 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBP04114 AL109923.1-201ENST00000618799 583 ntBASIC14.3□□□□□ -0.12
APOBP04114 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
APOBP04114 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
APOBP04114 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
APOBP04114 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 SLC6A10P-202ENST00000431994 2058 ntBASIC14.29□□□□□ -0.12
APOBP04114 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.29□□□□□ -0.12
APOBP04114 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBP04114 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBP04114 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBP04114 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
APOBP04114 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBP04114 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.29□□□□□ -0.12
APOBP04114 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.29□□□□□ -0.12
APOBP04114 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
APOBP04114 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
APOBP04114 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBP04114 MIR663A-201ENST00000385250 93 ntBASIC14.28□□□□□ -0.12
APOBP04114 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC14.28□□□□□ -0.12
APOBP04114 AL138781.1-201ENST00000566567 1274 ntBASIC14.28□□□□□ -0.12
APOBP04114 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBP04114 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC14.28□□□□□ -0.12
APOBP04114 AC009086.3-201ENST00000623486 1008 ntBASIC14.28□□□□□ -0.12
APOBP04114 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBP04114 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
APOBP04114 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
APOBP04114 NCF1B-203ENST00000435988 1254 ntBASIC14.28□□□□□ -0.12
APOBP04114 AC026185.1-201ENST00000445748 174 ntBASIC14.28□□□□□ -0.12
APOBP04114 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBP04114 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.28□□□□□ -0.12
APOBP04114 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
APOBP04114 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC14.28□□□□□ -0.12
APOBP04114 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
APOBP04114 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.27□□□□□ -0.12
APOBP04114 MIR4651-201ENST00000582622 73 ntBASIC14.27□□□□□ -0.12
APOBP04114 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBP04114 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBP04114 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBP04114 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
APOBP04114 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
APOBP04114 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.27□□□□□ -0.12
APOBP04114 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
APOBP04114 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBP04114 AC133637.1-201ENST00000624115 1537 ntBASIC14.27□□□□□ -0.13
APOBP04114 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC14.27□□□□□ -0.13
APOBP04114 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.27□□□□□ -0.13
APOBP04114 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBP04114 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
APOBP04114 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.27□□□□□ -0.13
APOBP04114 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC14.27□□□□□ -0.13
APOBP04114 TMEM191A-211ENST00000637163 1067 ntBASIC14.27□□□□□ -0.13
APOBP04114 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
APOBP04114 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC14.26□□□□□ -0.13
APOBP04114 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC14.26□□□□□ -0.13
APOBP04114 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
APOBP04114 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC14.26□□□□□ -0.13
APOBP04114 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
APOBP04114 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBP04114 AL354811.1-201ENST00000610286 706 ntBASIC14.25□□□□□ -0.13
APOBP04114 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC14.25□□□□□ -0.13
APOBP04114 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBP04114 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBP04114 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBP04114 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBP04114 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.25□□□□□ -0.13
APOBP04114 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.25□□□□□ -0.13
APOBP04114 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC14.25□□□□□ -0.13
APOBP04114 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
APOBP04114 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
APOBP04114 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
APOBP04114 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
APOBP04114 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
APOBP04114 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms