Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PDGFAP04085 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFAP04085 AC079834.2-201ENST00000609776 1949 ntBASIC20.94■□□□□ 0.94
PDGFAP04085 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.94■□□□□ 0.94
PDGFAP04085 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFAP04085 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.94■□□□□ 0.94
PDGFAP04085 AC233992.3-201ENST00000607491 485 ntBASIC20.94■□□□□ 0.94
PDGFAP04085 IKBKGP1-201ENST00000612193 1073 ntBASIC20.94■□□□□ 0.94
PDGFAP04085 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.94■□□□□ 0.94
PDGFAP04085 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.94■□□□□ 0.94
PDGFAP04085 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PDGFAP04085 AC092803.2-201ENST00000564287 1899 ntBASIC20.94■□□□□ 0.94
PDGFAP04085 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFAP04085 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PDGFAP04085 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFAP04085 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFAP04085 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFAP04085 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFAP04085 MIR3181-201ENST00000578512 73 ntBASIC20.93■□□□□ 0.94
PDGFAP04085 AC241377.3-202ENST00000626088 1088 ntBASIC20.93■□□□□ 0.94
PDGFAP04085 AC241585.3-202ENST00000628937 1088 ntBASIC20.93■□□□□ 0.94
PDGFAP04085 AC245100.8-202ENST00000629247 1058 ntBASIC20.93■□□□□ 0.94
PDGFAP04085 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PDGFAP04085 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.92■□□□□ 0.94
PDGFAP04085 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 BX842568.3-201ENST00000418104 571 ntBASIC20.92■□□□□ 0.94
PDGFAP04085 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.92■□□□□ 0.94
PDGFAP04085 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.92■□□□□ 0.94
PDGFAP04085 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
PDGFAP04085 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.92■□□□□ 0.94
PDGFAP04085 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PDGFAP04085 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFAP04085 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFAP04085 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFAP04085 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PDGFAP04085 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFAP04085 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFAP04085 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFAP04085 AC090192.1-201ENST00000517740 490 ntBASIC20.91■□□□□ 0.94
PDGFAP04085 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.91■□□□□ 0.94
PDGFAP04085 AL022069.1-201ENST00000568025 1636 ntBASIC20.91■□□□□ 0.94
PDGFAP04085 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFAP04085 AC009086.3-201ENST00000623486 1008 ntBASIC20.91■□□□□ 0.94
PDGFAP04085 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.91■□□□□ 0.94
PDGFAP04085 AL031602.1-201ENST00000633169 911 ntBASIC20.91■□□□□ 0.94
PDGFAP04085 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PDGFAP04085 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.9■□□□□ 0.94
PDGFAP04085 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PDGFAP04085 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.9■□□□□ 0.94
PDGFAP04085 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.9■□□□□ 0.94
PDGFAP04085 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.9■□□□□ 0.94
PDGFAP04085 RARRES2P11-201ENST00000635158 484 ntBASIC20.9■□□□□ 0.94
PDGFAP04085 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDGFAP04085 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDGFAP04085 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDGFAP04085 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.89■□□□□ 0.94
PDGFAP04085 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFAP04085 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFAP04085 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.89■□□□□ 0.93
PDGFAP04085 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
PDGFAP04085 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFAP04085 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PDGFAP04085 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFAP04085 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDGFAP04085 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.89■□□□□ 0.93
PDGFAP04085 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.88■□□□□ 0.93
PDGFAP04085 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.88■□□□□ 0.93
PDGFAP04085 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
PDGFAP04085 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.88■□□□□ 0.93
PDGFAP04085 AC022517.1-201ENST00000592429 346 ntBASIC20.88■□□□□ 0.93
PDGFAP04085 MIR6089-201ENST00000616698 64 ntBASIC20.88■□□□□ 0.93
PDGFAP04085 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PDGFAP04085 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDGFAP04085 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms