Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
COL2A1P02458 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
COL2A1P02458 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC26.63■■□□□ 1.85
COL2A1P02458 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL2A1P02458 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
COL2A1P02458 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
COL2A1P02458 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.63■■□□□ 1.85
COL2A1P02458 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 AC133637.1-201ENST00000624115 1537 ntBASIC26.62■■□□□ 1.85
COL2A1P02458 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.62■■□□□ 1.85
COL2A1P02458 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 IGHV3-19-201ENST00000521488 291 ntBASIC26.62■■□□□ 1.85
COL2A1P02458 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
COL2A1P02458 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC26.62■■□□□ 1.85
COL2A1P02458 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC26.62■■□□□ 1.85
COL2A1P02458 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC26.62■■□□□ 1.85
COL2A1P02458 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL2A1P02458 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC26.61■■□□□ 1.85
COL2A1P02458 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
COL2A1P02458 AC126544.1-201ENST00000580842 1059 ntBASIC26.61■■□□□ 1.85
COL2A1P02458 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC26.61■■□□□ 1.85
COL2A1P02458 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC26.61■■□□□ 1.85
COL2A1P02458 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
COL2A1P02458 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL2A1P02458 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC26.6■■□□□ 1.85
COL2A1P02458 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.6■■□□□ 1.85
COL2A1P02458 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC26.6■■□□□ 1.85
COL2A1P02458 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
COL2A1P02458 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL2A1P02458 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL2A1P02458 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
COL2A1P02458 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
COL2A1P02458 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL2A1P02458 AC135731.1-201ENST00000569415 2548 ntBASIC26.59■■□□□ 1.85
COL2A1P02458 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
COL2A1P02458 AL162430.1-201ENST00000480705 870 ntBASIC26.59■■□□□ 1.85
COL2A1P02458 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL2A1P02458 TSPY26P-201ENST00000476365 1326 ntBASIC26.58■■□□□ 1.85
COL2A1P02458 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL2A1P02458 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL2A1P02458 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
COL2A1P02458 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC26.58■■□□□ 1.85
COL2A1P02458 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL2A1P02458 SP2-202ENST00000613139 908 ntTSL 5 BASIC26.58■■□□□ 1.85
COL2A1P02458 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC26.58■■□□□ 1.85
COL2A1P02458 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
COL2A1P02458 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.57■■□□□ 1.84
COL2A1P02458 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL2A1P02458 AC027612.3-201ENST00000413684 1047 ntBASIC26.57■■□□□ 1.84
COL2A1P02458 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC26.57■■□□□ 1.84
COL2A1P02458 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL2A1P02458 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC26.57■■□□□ 1.84
COL2A1P02458 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL2A1P02458 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL2A1P02458 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
COL2A1P02458 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
COL2A1P02458 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL2A1P02458 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
COL2A1P02458 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC26.56■■□□□ 1.84
COL2A1P02458 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC26.56■■□□□ 1.84
COL2A1P02458 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
COL2A1P02458 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 AC144652.1-201ENST00000609974 1624 ntBASIC26.56■■□□□ 1.84
COL2A1P02458 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.56■■□□□ 1.84
COL2A1P02458 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
COL2A1P02458 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.55■■□□□ 1.84
COL2A1P02458 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC26.55■■□□□ 1.84
COL2A1P02458 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC26.55■■□□□ 1.84
COL2A1P02458 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
COL2A1P02458 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
COL2A1P02458 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
COL2A1P02458 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
COL2A1P02458 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
COL2A1P02458 YBX1P1-201ENST00000445822 960 ntBASIC26.55■■□□□ 1.84
COL2A1P02458 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC26.54■■□□□ 1.84
COL2A1P02458 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL2A1P02458 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
COL2A1P02458 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL2A1P02458 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
COL2A1P02458 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
COL2A1P02458 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
COL2A1P02458 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.54■■□□□ 1.84
COL2A1P02458 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms