Protein–RNA interactions for Protein: P01138

NGF, Beta-nerve growth factor, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NGFP01138 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NGFP01138 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NGFP01138 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NGFP01138 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NGFP01138 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NGFP01138 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
NGFP01138 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
NGFP01138 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
NGFP01138 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.48■□□□□ 0.71
NGFP01138 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
NGFP01138 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
NGFP01138 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
NGFP01138 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
NGFP01138 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.47■□□□□ 0.71
NGFP01138 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
NGFP01138 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.47■□□□□ 0.71
NGFP01138 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
NGFP01138 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 MIR3621-201ENST00000580529 85 ntBASIC19.46■□□□□ 0.71
NGFP01138 AL356740.2-201ENST00000601559 647 ntBASIC19.46■□□□□ 0.71
NGFP01138 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.46■□□□□ 0.71
NGFP01138 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 AC009102.2-201ENST00000606772 1639 ntBASIC19.46■□□□□ 0.71
NGFP01138 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
NGFP01138 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.45■□□□□ 0.7
NGFP01138 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.45■□□□□ 0.7
NGFP01138 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.45■□□□□ 0.7
NGFP01138 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.45■□□□□ 0.7
NGFP01138 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
NGFP01138 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.45■□□□□ 0.7
NGFP01138 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
NGFP01138 AC079630.1-202ENST00000618127 1840 ntBASIC19.44■□□□□ 0.7
NGFP01138 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.44■□□□□ 0.7
NGFP01138 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.44■□□□□ 0.7
NGFP01138 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
NGFP01138 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
NGFP01138 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.43■□□□□ 0.7
NGFP01138 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.43■□□□□ 0.7
NGFP01138 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.43■□□□□ 0.7
NGFP01138 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
NGFP01138 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.43■□□□□ 0.7
NGFP01138 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
NGFP01138 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.43■□□□□ 0.7
NGFP01138 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
NGFP01138 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.42■□□□□ 0.7
NGFP01138 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.42■□□□□ 0.7
NGFP01138 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.42■□□□□ 0.7
NGFP01138 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.42■□□□□ 0.7
NGFP01138 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.42■□□□□ 0.7
NGFP01138 AC092068.2-201ENST00000590491 1708 ntBASIC19.42■□□□□ 0.7
NGFP01138 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
NGFP01138 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.42■□□□□ 0.7
NGFP01138 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.42■□□□□ 0.7
NGFP01138 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
NGFP01138 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms