Protein–RNA interactions for Protein: O75419

CDC45, Cell division control protein 45 homolog, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC45O75419 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC45O75419 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
CDC45O75419 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
CDC45O75419 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
CDC45O75419 YBX1P4-201ENST00000392794 808 ntBASIC27.39■■□□□ 1.98
CDC45O75419 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.39■■□□□ 1.98
CDC45O75419 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC27.39■■□□□ 1.98
CDC45O75419 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC27.39■■□□□ 1.98
CDC45O75419 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CDC45O75419 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.39■■□□□ 1.97
CDC45O75419 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC27.39■■□□□ 1.97
CDC45O75419 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
CDC45O75419 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC45O75419 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC27.38■■□□□ 1.97
CDC45O75419 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDC45O75419 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC45O75419 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC45O75419 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC27.38■■□□□ 1.97
CDC45O75419 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC27.38■■□□□ 1.97
CDC45O75419 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CDC45O75419 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
CDC45O75419 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
CDC45O75419 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
CDC45O75419 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC45O75419 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC45O75419 GCA-201ENST00000233612 1694 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC45O75419 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC45O75419 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC45O75419 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC27.37■■□□□ 1.97
CDC45O75419 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
CDC45O75419 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC27.36■■□□□ 1.97
CDC45O75419 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC45O75419 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.36■■□□□ 1.97
CDC45O75419 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC45O75419 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
CDC45O75419 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
CDC45O75419 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
CDC45O75419 COMT-203ENST00000403184 2217 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC45O75419 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CDC45O75419 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.35■■□□□ 1.97
CDC45O75419 TK2-216ENST00000564917 1156 ntTSL 3 BASIC27.35■■□□□ 1.97
CDC45O75419 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC27.35■■□□□ 1.97
CDC45O75419 AC137630.3-201ENST00000607245 391 ntBASIC27.35■■□□□ 1.97
CDC45O75419 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
CDC45O75419 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC45O75419 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC27.34■■□□□ 1.97
CDC45O75419 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.34■■□□□ 1.97
CDC45O75419 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC45O75419 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC45O75419 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC45O75419 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC45O75419 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.34■■□□□ 1.97
CDC45O75419 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.34■■□□□ 1.97
CDC45O75419 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC27.34■■□□□ 1.97
CDC45O75419 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
CDC45O75419 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC27.33■■□□□ 1.97
CDC45O75419 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDC45O75419 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC27.33■■□□□ 1.97
CDC45O75419 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC27.33■■□□□ 1.97
CDC45O75419 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDC45O75419 REST-206ENST00000612429 1376 ntTSL 5 BASIC27.33■■□□□ 1.97
CDC45O75419 REST-207ENST00000616975 1370 ntTSL 5 BASIC27.33■■□□□ 1.97
CDC45O75419 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
CDC45O75419 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.96
CDC45O75419 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC27.33■■□□□ 1.96
CDC45O75419 TERT-206ENST00000508104 2486 ntTSL 5 BASIC27.32■■□□□ 1.96
CDC45O75419 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC27.32■■□□□ 1.96
CDC45O75419 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC27.32■■□□□ 1.96
CDC45O75419 AL031848.2-201ENST00000607670 837 ntBASIC27.32■■□□□ 1.96
CDC45O75419 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC45O75419 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC27.32■■□□□ 1.96
CDC45O75419 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
CDC45O75419 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC45O75419 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.31■■□□□ 1.96
CDC45O75419 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC45O75419 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
CDC45O75419 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC45O75419 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC27.31■■□□□ 1.96
CDC45O75419 AL353803.4-201ENST00000565882 1934 ntBASIC27.31■■□□□ 1.96
CDC45O75419 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
CDC45O75419 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
CDC45O75419 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC45O75419 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC45O75419 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC27.3■■□□□ 1.96
CDC45O75419 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC45O75419 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC27.3■■□□□ 1.96
CDC45O75419 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC45O75419 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
CDC45O75419 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CDC45O75419 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC27.29■■□□□ 1.96
CDC45O75419 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC27.29■■□□□ 1.96
CDC45O75419 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC27.29■■□□□ 1.96
CDC45O75419 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDC45O75419 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC27.29■■□□□ 1.96
CDC45O75419 GUSBP5-202ENST00000510805 1989 ntBASIC27.29■■□□□ 1.96
CDC45O75419 EP400NL-214ENST00000641289 2402 ntBASIC27.28■■□□□ 1.96
CDC45O75419 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CDC45O75419 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC27.28■■□□□ 1.96
CDC45O75419 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC27.28■■□□□ 1.96
CDC45O75419 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC27.28■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms