Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL512631.2-201ENST00000604634 923 ntBASIC20.85■□□□□ 0.93
TRIM3O75382 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM3O75382 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM3O75382 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM3O75382 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM3O75382 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM3O75382 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.84■□□□□ 0.93
TRIM3O75382 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
TRIM3O75382 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM3O75382 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM3O75382 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
TRIM3O75382 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM3O75382 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TRIM3O75382 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC20.83■□□□□ 0.93
TRIM3O75382 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.83■□□□□ 0.93
TRIM3O75382 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM3O75382 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM3O75382 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.83■□□□□ 0.92
TRIM3O75382 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
TRIM3O75382 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
TRIM3O75382 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.82■□□□□ 0.92
TRIM3O75382 MIR4466-201ENST00000606121 54 ntBASIC20.82■□□□□ 0.92
TRIM3O75382 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM3O75382 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM3O75382 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM3O75382 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM3O75382 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.81■□□□□ 0.92
TRIM3O75382 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TRIM3O75382 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TRIM3O75382 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM3O75382 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM3O75382 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.8■□□□□ 0.92
TRIM3O75382 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.8■□□□□ 0.92
TRIM3O75382 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM3O75382 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM3O75382 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM3O75382 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
TRIM3O75382 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TRIM3O75382 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
TRIM3O75382 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM3O75382 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM3O75382 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC20.79■□□□□ 0.92
TRIM3O75382 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
TRIM3O75382 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM3O75382 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TRIM3O75382 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
TRIM3O75382 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.78■□□□□ 0.92
TRIM3O75382 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TRIM3O75382 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.78■□□□□ 0.92
TRIM3O75382 AL136116.3-201ENST00000402907 1138 ntBASIC20.78■□□□□ 0.92
TRIM3O75382 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
TRIM3O75382 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
TRIM3O75382 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM3O75382 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM3O75382 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.77■□□□□ 0.92
TRIM3O75382 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM3O75382 ALDH1A3-203ENST00000557963 1670 ntBASIC20.77■□□□□ 0.92
TRIM3O75382 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM3O75382 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.77■□□□□ 0.92
TRIM3O75382 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM3O75382 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM3O75382 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM3O75382 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM3O75382 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM3O75382 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM3O75382 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM3O75382 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms