Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PRAMEF4O60810 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.72■■□□□ 1.07
PRAMEF4O60810 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF4O60810 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF4O60810 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF4O60810 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF4O60810 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.72■■□□□ 1.07
PRAMEF4O60810 UNC93B8-201ENST00000511903 705 ntBASIC21.72■■□□□ 1.07
PRAMEF4O60810 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF4O60810 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PRAMEF4O60810 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.72■■□□□ 1.07
PRAMEF4O60810 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 TSPY9P-201ENST00000440215 945 ntBASIC21.71■■□□□ 1.07
PRAMEF4O60810 TSPY11P-201ENST00000442607 1045 ntBASIC21.71■■□□□ 1.07
PRAMEF4O60810 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 AC005703.6-201ENST00000623265 1329 ntBASIC21.71■■□□□ 1.07
PRAMEF4O60810 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PRAMEF4O60810 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.71■■□□□ 1.07
PRAMEF4O60810 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
PRAMEF4O60810 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PRAMEF4O60810 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
PRAMEF4O60810 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.7■■□□□ 1.06
PRAMEF4O60810 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
PRAMEF4O60810 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PRAMEF4O60810 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PRAMEF4O60810 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF4O60810 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF4O60810 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF4O60810 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.69■■□□□ 1.06
PRAMEF4O60810 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.69■■□□□ 1.06
PRAMEF4O60810 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF4O60810 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.69■■□□□ 1.06
PRAMEF4O60810 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.69■■□□□ 1.06
PRAMEF4O60810 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF4O60810 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.69■■□□□ 1.06
PRAMEF4O60810 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
PRAMEF4O60810 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF4O60810 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PRAMEF4O60810 MTDHP2-201ENST00000601468 714 ntBASIC21.68■■□□□ 1.06
PRAMEF4O60810 AC010997.5-201ENST00000609182 354 ntBASIC21.68■■□□□ 1.06
PRAMEF4O60810 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.68■■□□□ 1.06
PRAMEF4O60810 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PRAMEF4O60810 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PRAMEF4O60810 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.67■■□□□ 1.06
PRAMEF4O60810 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF4O60810 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF4O60810 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF4O60810 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF4O60810 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.67■■□□□ 1.06
PRAMEF4O60810 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF4O60810 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.67■■□□□ 1.06
PRAMEF4O60810 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PRAMEF4O60810 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF4O60810 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF4O60810 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF4O60810 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF4O60810 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF4O60810 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.66■■□□□ 1.06
PRAMEF4O60810 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF4O60810 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PRAMEF4O60810 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.66■■□□□ 1.06
PRAMEF4O60810 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF4O60810 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
PRAMEF4O60810 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEF4O60810 GUSBP5-201ENST00000418136 578 ntBASIC21.65■■□□□ 1.06
PRAMEF4O60810 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
PRAMEF4O60810 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF4O60810 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.65■■□□□ 1.06
PRAMEF4O60810 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PRAMEF4O60810 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.65■■□□□ 1.06
PRAMEF4O60810 AL353803.4-201ENST00000565882 1934 ntBASIC21.65■■□□□ 1.06
PRAMEF4O60810 AC012676.1-201ENST00000574705 1949 ntBASIC21.65■■□□□ 1.06
PRAMEF4O60810 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PRAMEF4O60810 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF4O60810 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.64■■□□□ 1.05
PRAMEF4O60810 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PRAMEF4O60810 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.64■■□□□ 1.05
PRAMEF4O60810 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
PRAMEF4O60810 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PRAMEF4O60810 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms