Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 AC008764.7-201ENST00000593779 1081 ntBASIC23.93■■□□□ 1.42
TBC1D4O60343 MIR5787-201ENST00000611784 55 ntBASIC23.93■■□□□ 1.42
TBC1D4O60343 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.92■■□□□ 1.42
TBC1D4O60343 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
TBC1D4O60343 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.92■■□□□ 1.42
TBC1D4O60343 AC099791.1-201ENST00000416440 715 ntBASIC23.92■■□□□ 1.42
TBC1D4O60343 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.92■■□□□ 1.42
TBC1D4O60343 pRNA.6-201ENST00000610482 90 ntBASIC23.92■■□□□ 1.42
TBC1D4O60343 pRNA.5-201ENST00000612139 90 ntBASIC23.92■■□□□ 1.42
TBC1D4O60343 pRNA.11-201ENST00000618423 90 ntBASIC23.92■■□□□ 1.42
TBC1D4O60343 pRNA.13-201ENST00000619112 90 ntBASIC23.92■■□□□ 1.42
TBC1D4O60343 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.92■■□□□ 1.42
TBC1D4O60343 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D4O60343 BX842568.3-201ENST00000418104 571 ntBASIC23.91■■□□□ 1.42
TBC1D4O60343 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D4O60343 AC233992.3-201ENST00000607491 485 ntBASIC23.91■■□□□ 1.42
TBC1D4O60343 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D4O60343 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D4O60343 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC23.91■■□□□ 1.42
TBC1D4O60343 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TBC1D4O60343 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.9■■□□□ 1.42
TBC1D4O60343 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TBC1D4O60343 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.9■■□□□ 1.42
TBC1D4O60343 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D4O60343 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D4O60343 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D4O60343 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D4O60343 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TBC1D4O60343 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.89■■□□□ 1.41
TBC1D4O60343 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
TBC1D4O60343 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D4O60343 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D4O60343 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
TBC1D4O60343 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.88■■□□□ 1.41
TBC1D4O60343 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D4O60343 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D4O60343 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D4O60343 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TBC1D4O60343 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TBC1D4O60343 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
TBC1D4O60343 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TBC1D4O60343 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TBC1D4O60343 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
TBC1D4O60343 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
TBC1D4O60343 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
TBC1D4O60343 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
TBC1D4O60343 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.85■■□□□ 1.41
TBC1D4O60343 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TBC1D4O60343 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TBC1D4O60343 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D4O60343 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D4O60343 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D4O60343 FP325331.1-202ENST00000623531 1380 ntBASIC23.84■■□□□ 1.41
TBC1D4O60343 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TBC1D4O60343 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.84■■□□□ 1.41
TBC1D4O60343 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
TBC1D4O60343 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.84■■□□□ 1.41
TBC1D4O60343 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.84■■□□□ 1.41
TBC1D4O60343 AL499627.2-201ENST00000606283 725 ntBASIC23.84■■□□□ 1.41
TBC1D4O60343 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TBC1D4O60343 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.83■■□□□ 1.41
TBC1D4O60343 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TBC1D4O60343 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
TBC1D4O60343 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TBC1D4O60343 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TBC1D4O60343 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.83■■□□□ 1.4
TBC1D4O60343 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
TBC1D4O60343 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
TBC1D4O60343 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
TBC1D4O60343 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D4O60343 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D4O60343 IRS3P-201ENST00000223076 1006 ntBASIC23.82■■□□□ 1.4
TBC1D4O60343 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.82■■□□□ 1.4
TBC1D4O60343 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.82■■□□□ 1.4
TBC1D4O60343 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.82■■□□□ 1.4
TBC1D4O60343 MIR6821-201ENST00000617625 74 ntBASIC23.82■■□□□ 1.4
TBC1D4O60343 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TBC1D4O60343 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms