Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
PEX1O43933 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
PEX1O43933 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
PEX1O43933 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.78■■□□□ 1.08
PEX1O43933 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
PEX1O43933 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
PEX1O43933 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
PEX1O43933 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.77■■□□□ 1.08
PEX1O43933 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
PEX1O43933 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.77■■□□□ 1.08
PEX1O43933 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PEX1O43933 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
PEX1O43933 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PEX1O43933 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PEX1O43933 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PEX1O43933 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PEX1O43933 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PEX1O43933 FOXO3B-201ENST00000395675 1928 ntBASIC21.76■■□□□ 1.07
PEX1O43933 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
PEX1O43933 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 DUSP8P3-201ENST00000399571 1760 ntBASIC21.75■■□□□ 1.07
PEX1O43933 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
PEX1O43933 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.75■■□□□ 1.07
PEX1O43933 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.75■■□□□ 1.07
PEX1O43933 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.75■■□□□ 1.07
PEX1O43933 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
PEX1O43933 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.75■■□□□ 1.07
PEX1O43933 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX1O43933 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX1O43933 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PEX1O43933 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PEX1O43933 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.74■■□□□ 1.07
PEX1O43933 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.74■■□□□ 1.07
PEX1O43933 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX1O43933 HLA-L-211ENST00000482052 1765 ntBASIC21.74■■□□□ 1.07
PEX1O43933 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PEX1O43933 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX1O43933 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
PEX1O43933 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX1O43933 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX1O43933 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PEX1O43933 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PEX1O43933 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX1O43933 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX1O43933 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC21.72■■□□□ 1.07
PEX1O43933 KRT18P24-201ENST00000344739 1156 ntBASIC21.72■■□□□ 1.07
PEX1O43933 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
PEX1O43933 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
PEX1O43933 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
PEX1O43933 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
PEX1O43933 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.72■■□□□ 1.07
PEX1O43933 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PEX1O43933 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
PEX1O43933 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.72■■□□□ 1.07
PEX1O43933 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 AC239859.2-201ENST00000444165 318 ntBASIC21.71■■□□□ 1.07
PEX1O43933 THA1P-201ENST00000590384 1145 ntBASIC21.71■■□□□ 1.07
PEX1O43933 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.71■■□□□ 1.07
PEX1O43933 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
PEX1O43933 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
PEX1O43933 ANOS2P-203ENST00000472227 1816 ntBASIC21.71■■□□□ 1.07
PEX1O43933 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
PEX1O43933 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.7■■□□□ 1.07
PEX1O43933 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.7■■□□□ 1.07
PEX1O43933 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
PEX1O43933 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
PEX1O43933 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX1O43933 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.7■■□□□ 1.06
PEX1O43933 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.7■■□□□ 1.06
PEX1O43933 AL592295.1-201ENST00000400984 884 ntBASIC21.7■■□□□ 1.06
PEX1O43933 GUSBP5-201ENST00000418136 578 ntBASIC21.7■■□□□ 1.06
PEX1O43933 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.7■■□□□ 1.06
PEX1O43933 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.7■■□□□ 1.06
PEX1O43933 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX1O43933 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
PEX1O43933 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.7■■□□□ 1.06
PEX1O43933 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
PEX1O43933 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
PEX1O43933 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.69■■□□□ 1.06
PEX1O43933 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms