Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6DO43924 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6DO43924 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6DO43924 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6DO43924 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6DO43924 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6DO43924 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6DO43924 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6DO43924 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6DO43924 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.42■□□□□ 0.38
PDE6DO43924 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.42■□□□□ 0.38
PDE6DO43924 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.42■□□□□ 0.38
PDE6DO43924 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
PDE6DO43924 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PDE6DO43924 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.41■□□□□ 0.38
PDE6DO43924 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6DO43924 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PDE6DO43924 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.41■□□□□ 0.38
PDE6DO43924 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PDE6DO43924 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.4■□□□□ 0.38
PDE6DO43924 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6DO43924 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6DO43924 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.4■□□□□ 0.38
PDE6DO43924 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PDE6DO43924 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
PDE6DO43924 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6DO43924 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 KRT18P10-201ENST00000388836 1287 ntBASIC17.4■□□□□ 0.38
PDE6DO43924 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC17.4■□□□□ 0.38
PDE6DO43924 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PDE6DO43924 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PDE6DO43924 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.39■□□□□ 0.38
PDE6DO43924 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6DO43924 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.39■□□□□ 0.37
PDE6DO43924 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC17.39■□□□□ 0.37
PDE6DO43924 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
PDE6DO43924 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDE6DO43924 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PDE6DO43924 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PDE6DO43924 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 FBXW4P1-201ENST00000426721 2239 ntBASIC17.38■□□□□ 0.37
PDE6DO43924 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PDE6DO43924 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6DO43924 AC139530.1-201ENST00000575312 1977 ntBASIC17.38■□□□□ 0.37
PDE6DO43924 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
PDE6DO43924 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
PDE6DO43924 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.38■□□□□ 0.37
PDE6DO43924 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PDE6DO43924 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
PDE6DO43924 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.37■□□□□ 0.37
PDE6DO43924 AC025884.2-201ENST00000553429 711 ntBASIC17.37■□□□□ 0.37
PDE6DO43924 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PDE6DO43924 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms