Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRAF3IP2O43734 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 AC079630.1-202ENST00000618127 1840 ntBASIC20.06■□□□□ 0.8
TRAF3IP2O43734 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.06■□□□□ 0.8
TRAF3IP2O43734 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRAF3IP2O43734 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRAF3IP2O43734 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 DUSP8P3-201ENST00000399571 1760 ntBASIC20.03■□□□□ 0.8
TRAF3IP2O43734 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.03■□□□□ 0.8
TRAF3IP2O43734 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.02■□□□□ 0.8
TRAF3IP2O43734 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.02■□□□□ 0.8
TRAF3IP2O43734 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
TRAF3IP2O43734 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TRAF3IP2O43734 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20■□□□□ 0.79
TRAF3IP2O43734 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 AL356441.2-201ENST00000443009 864 ntBASIC20■□□□□ 0.79
TRAF3IP2O43734 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20■□□□□ 0.79
TRAF3IP2O43734 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 AC009102.2-201ENST00000606772 1639 ntBASIC20■□□□□ 0.79
TRAF3IP2O43734 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRAF3IP2O43734 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAF3IP2O43734 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAF3IP2O43734 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRAF3IP2O43734 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.99■□□□□ 0.79
TRAF3IP2O43734 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRAF3IP2O43734 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.99■□□□□ 0.79
TRAF3IP2O43734 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.98■□□□□ 0.79
TRAF3IP2O43734 AC144652.1-201ENST00000609974 1624 ntBASIC19.98■□□□□ 0.79
TRAF3IP2O43734 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms