Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SGCEO43556 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.79■□□□□ 0.76
SGCEO43556 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SGCEO43556 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SGCEO43556 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SGCEO43556 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SGCEO43556 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.78■□□□□ 0.76
SGCEO43556 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.78■□□□□ 0.76
SGCEO43556 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.78■□□□□ 0.76
SGCEO43556 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
SGCEO43556 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SGCEO43556 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SGCEO43556 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SGCEO43556 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SGCEO43556 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.77■□□□□ 0.76
SGCEO43556 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
SGCEO43556 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SGCEO43556 AC079834.2-201ENST00000609776 1949 ntBASIC19.77■□□□□ 0.76
SGCEO43556 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SGCEO43556 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SGCEO43556 MTDHP2-201ENST00000601468 714 ntBASIC19.77■□□□□ 0.76
SGCEO43556 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
SGCEO43556 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SGCEO43556 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SGCEO43556 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.76■□□□□ 0.75
SGCEO43556 AC005703.6-201ENST00000623265 1329 ntBASIC19.76■□□□□ 0.75
SGCEO43556 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.76■□□□□ 0.75
SGCEO43556 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SGCEO43556 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SGCEO43556 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGCEO43556 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGCEO43556 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGCEO43556 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGCEO43556 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SGCEO43556 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.76■□□□□ 0.75
SGCEO43556 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SGCEO43556 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.76■□□□□ 0.75
SGCEO43556 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SGCEO43556 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SGCEO43556 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.75■□□□□ 0.75
SGCEO43556 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGCEO43556 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGCEO43556 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SGCEO43556 AC092068.2-201ENST00000590491 1708 ntBASIC19.75■□□□□ 0.75
SGCEO43556 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGCEO43556 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.75■□□□□ 0.75
SGCEO43556 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.75■□□□□ 0.75
SGCEO43556 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGCEO43556 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGCEO43556 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SGCEO43556 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SGCEO43556 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SGCEO43556 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.74■□□□□ 0.75
SGCEO43556 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.74■□□□□ 0.75
SGCEO43556 TSPY9P-201ENST00000440215 945 ntBASIC19.74■□□□□ 0.75
SGCEO43556 TSPY11P-201ENST00000442607 1045 ntBASIC19.74■□□□□ 0.75
SGCEO43556 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.74■□□□□ 0.75
SGCEO43556 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
SGCEO43556 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SGCEO43556 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.73■□□□□ 0.75
SGCEO43556 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SGCEO43556 AL035685.1-201ENST00000636663 812 ntBASIC19.73■□□□□ 0.75
SGCEO43556 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SGCEO43556 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.72■□□□□ 0.75
SGCEO43556 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SGCEO43556 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.72■□□□□ 0.75
SGCEO43556 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.72■□□□□ 0.75
SGCEO43556 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.72■□□□□ 0.75
SGCEO43556 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SGCEO43556 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms