Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYRM1O43325 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LYRM1O43325 MIR3665-201ENST00000578708 105 ntBASIC19.35■□□□□ 0.69
LYRM1O43325 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LYRM1O43325 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.35■□□□□ 0.69
LYRM1O43325 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.35■□□□□ 0.69
LYRM1O43325 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYRM1O43325 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYRM1O43325 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LYRM1O43325 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYRM1O43325 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYRM1O43325 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LYRM1O43325 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LYRM1O43325 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LYRM1O43325 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LYRM1O43325 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LYRM1O43325 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LYRM1O43325 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LYRM1O43325 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.33■□□□□ 0.69
LYRM1O43325 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYRM1O43325 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LYRM1O43325 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LYRM1O43325 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.33■□□□□ 0.68
LYRM1O43325 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYRM1O43325 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
LYRM1O43325 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LYRM1O43325 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.33■□□□□ 0.68
LYRM1O43325 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LYRM1O43325 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 CHST11-203ENST00000547956 936 ntTSL 2 BASIC19.32■□□□□ 0.68
LYRM1O43325 MED25-210ENST00000612854 801 ntTSL 5 BASIC19.32■□□□□ 0.68
LYRM1O43325 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 MED25-214ENST00000622402 642 ntTSL 5 BASIC19.32■□□□□ 0.68
LYRM1O43325 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.32■□□□□ 0.68
LYRM1O43325 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 AL161729.1-201ENST00000604104 1402 ntBASIC19.32■□□□□ 0.68
LYRM1O43325 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.32■□□□□ 0.68
LYRM1O43325 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC19.32■□□□□ 0.68
LYRM1O43325 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LYRM1O43325 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LYRM1O43325 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.31■□□□□ 0.68
LYRM1O43325 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LYRM1O43325 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LYRM1O43325 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LYRM1O43325 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.31■□□□□ 0.68
LYRM1O43325 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LYRM1O43325 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LYRM1O43325 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LYRM1O43325 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.3■□□□□ 0.68
LYRM1O43325 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.3■□□□□ 0.68
LYRM1O43325 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LYRM1O43325 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
LYRM1O43325 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
LYRM1O43325 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LYRM1O43325 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYRM1O43325 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
LYRM1O43325 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYRM1O43325 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LYRM1O43325 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.29■□□□□ 0.68
LYRM1O43325 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.28■□□□□ 0.68
LYRM1O43325 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.28■□□□□ 0.68
LYRM1O43325 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
LYRM1O43325 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.28■□□□□ 0.68
LYRM1O43325 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LYRM1O43325 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.27■□□□□ 0.68
LYRM1O43325 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LYRM1O43325 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LYRM1O43325 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.27■□□□□ 0.68
LYRM1O43325 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms