Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
NDUFA4O00483 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA4O00483 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA4O00483 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NDUFA4O00483 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
NDUFA4O00483 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA4O00483 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NDUFA4O00483 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA4O00483 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC17.26■□□□□ 0.35
NDUFA4O00483 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
NDUFA4O00483 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.26■□□□□ 0.35
NDUFA4O00483 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NDUFA4O00483 AC079630.1-202ENST00000618127 1840 ntBASIC17.26■□□□□ 0.35
NDUFA4O00483 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFA4O00483 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.25■□□□□ 0.35
NDUFA4O00483 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
NDUFA4O00483 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.25■□□□□ 0.35
NDUFA4O00483 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 DUSP8P3-201ENST00000399571 1760 ntBASIC17.25■□□□□ 0.35
NDUFA4O00483 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
NDUFA4O00483 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.24■□□□□ 0.35
NDUFA4O00483 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
NDUFA4O00483 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NDUFA4O00483 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.24■□□□□ 0.35
NDUFA4O00483 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NDUFA4O00483 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC17.23■□□□□ 0.35
NDUFA4O00483 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFA4O00483 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.23■□□□□ 0.35
NDUFA4O00483 AC144652.1-201ENST00000609974 1624 ntBASIC17.23■□□□□ 0.35
NDUFA4O00483 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC17.23■□□□□ 0.35
NDUFA4O00483 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.23■□□□□ 0.35
NDUFA4O00483 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NDUFA4O00483 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NDUFA4O00483 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NDUFA4O00483 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA4O00483 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NDUFA4O00483 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.22■□□□□ 0.35
NDUFA4O00483 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA4O00483 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC17.22■□□□□ 0.35
NDUFA4O00483 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA4O00483 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA4O00483 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NDUFA4O00483 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.22■□□□□ 0.35
NDUFA4O00483 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NDUFA4O00483 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NDUFA4O00483 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA4O00483 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFA4O00483 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFA4O00483 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA4O00483 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.21■□□□□ 0.35
NDUFA4O00483 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA4O00483 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA4O00483 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA4O00483 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
NDUFA4O00483 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
NDUFA4O00483 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NDUFA4O00483 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
NDUFA4O00483 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC17.2■□□□□ 0.34
NDUFA4O00483 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 FP325331.1-202ENST00000623531 1380 ntBASIC17.2■□□□□ 0.34
NDUFA4O00483 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
NDUFA4O00483 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.2■□□□□ 0.34
NDUFA4O00483 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC17.2■□□□□ 0.34
NDUFA4O00483 GRAMD4P7-201ENST00000578182 1232 ntBASIC17.2■□□□□ 0.34
NDUFA4O00483 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
NDUFA4O00483 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
NDUFA4O00483 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC17.19■□□□□ 0.34
NDUFA4O00483 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NDUFA4O00483 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NDUFA4O00483 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms