Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
RTCAO00442 AC079630.1-202ENST00000618127 1840 ntBASIC21.46■■□□□ 1.03
RTCAO00442 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.46■■□□□ 1.03
RTCAO00442 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.46■■□□□ 1.03
RTCAO00442 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
RTCAO00442 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
RTCAO00442 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.45■■□□□ 1.03
RTCAO00442 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCAO00442 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCAO00442 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCAO00442 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCAO00442 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTCAO00442 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCAO00442 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.45■■□□□ 1.02
RTCAO00442 GRAMD4P7-201ENST00000578182 1232 ntBASIC21.45■■□□□ 1.02
RTCAO00442 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCAO00442 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RTCAO00442 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.45■■□□□ 1.02
RTCAO00442 AC092068.2-201ENST00000590491 1708 ntBASIC21.45■■□□□ 1.02
RTCAO00442 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
RTCAO00442 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
RTCAO00442 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCAO00442 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
RTCAO00442 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.44■■□□□ 1.02
RTCAO00442 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.44■■□□□ 1.02
RTCAO00442 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.44■■□□□ 1.02
RTCAO00442 MIR6724-1-201ENST00000616420 92 ntBASIC21.44■■□□□ 1.02
RTCAO00442 MIR6724-2-201ENST00000616483 92 ntBASIC21.44■■□□□ 1.02
RTCAO00442 MIR6724-4-201ENST00000617390 92 ntBASIC21.44■■□□□ 1.02
RTCAO00442 MIR6724-3-201ENST00000622482 92 ntBASIC21.44■■□□□ 1.02
RTCAO00442 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCAO00442 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCAO00442 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
RTCAO00442 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
RTCAO00442 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RTCAO00442 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCAO00442 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
RTCAO00442 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCAO00442 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCAO00442 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCAO00442 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
RTCAO00442 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RTCAO00442 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.43■■□□□ 1.02
RTCAO00442 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RTCAO00442 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RTCAO00442 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
RTCAO00442 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.42■■□□□ 1.02
RTCAO00442 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.42■■□□□ 1.02
RTCAO00442 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.42■■□□□ 1.02
RTCAO00442 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RTCAO00442 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.42■■□□□ 1.02
RTCAO00442 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RTCAO00442 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
RTCAO00442 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
RTCAO00442 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.41■■□□□ 1.02
RTCAO00442 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.41■■□□□ 1.02
RTCAO00442 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCAO00442 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
RTCAO00442 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCAO00442 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RTCAO00442 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.41■■□□□ 1.02
RTCAO00442 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RTCAO00442 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RTCAO00442 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.4■■□□□ 1.02
RTCAO00442 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.4■■□□□ 1.02
RTCAO00442 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCAO00442 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCAO00442 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RTCAO00442 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.4■■□□□ 1.02
RTCAO00442 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RTCAO00442 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.39■■□□□ 1.02
RTCAO00442 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RTCAO00442 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC21.39■■□□□ 1.01
RTCAO00442 AL356441.2-201ENST00000443009 864 ntBASIC21.39■■□□□ 1.01
RTCAO00442 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.39■■□□□ 1.01
RTCAO00442 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.39■■□□□ 1.01
RTCAO00442 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTCAO00442 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
RTCAO00442 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCAO00442 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.39■■□□□ 1.01
RTCAO00442 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.39■■□□□ 1.01
RTCAO00442 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RTCAO00442 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCAO00442 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
RTCAO00442 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCAO00442 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCAO00442 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCAO00442 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.38■■□□□ 1.01
RTCAO00442 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCAO00442 DUSP8P3-201ENST00000399571 1760 ntBASIC21.38■■□□□ 1.01
RTCAO00442 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.38■■□□□ 1.01
RTCAO00442 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RTCAO00442 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms