Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 AC007375.3-201ENST00000600936 2314 ntBASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 EP400NL-214ENST00000641289 2402 ntBASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CHKB-CPT1BH3BT56 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 AC138932.3-201ENST00000567634 1902 ntBASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 AP004609.3-201ENST00000610705 1884 ntBASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.64□□□□□ -0.39
CHKB-CPT1BH3BT56 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 AC100797.4-201ENST00000631653 1827 ntBASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 AC022211.4-201ENST00000625094 2161 ntBASIC12.63□□□□□ -0.39
CHKB-CPT1BH3BT56 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 AC137767.1-201ENST00000602918 1920 ntBASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CHKB-CPT1BH3BT56 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 AC097639.1-201ENST00000565519 1891 ntBASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CHKB-CPT1BH3BT56 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHKB-CPT1BH3BT56 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms