Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RBFOX3A6NFN3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 MIR3665-201ENST00000578708 105 ntBASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
RBFOX3A6NFN3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 AC139530.1-201ENST00000575312 1977 ntBASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.73■□□□□ 0.43
RBFOX3A6NFN3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RBFOX3A6NFN3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 H19-210ENST00000439725 1929 ntTSL 2 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RBFOX3A6NFN3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 AP006261.1-201ENST00000584783 668 ntBASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 AC148477.6-201ENST00000623746 465 ntBASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RBFOX3A6NFN3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RBFOX3A6NFN3 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.68■□□□□ 0.42
RBFOX3A6NFN3 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms