Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRABD2BA6NFA1 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABD2BA6NFA1 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRABD2BA6NFA1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.65■■□□□ 1.06
TRABD2BA6NFA1 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRABD2BA6NFA1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRABD2BA6NFA1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.64■■□□□ 1.06
TRABD2BA6NFA1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRABD2BA6NFA1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.64■■□□□ 1.06
TRABD2BA6NFA1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.64■■□□□ 1.05
TRABD2BA6NFA1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.64■■□□□ 1.05
TRABD2BA6NFA1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
TRABD2BA6NFA1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
TRABD2BA6NFA1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.64■■□□□ 1.05
TRABD2BA6NFA1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 pRNA.6-201ENST00000610482 90 ntBASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 pRNA.5-201ENST00000612139 90 ntBASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 pRNA.11-201ENST00000618423 90 ntBASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 pRNA.13-201ENST00000619112 90 ntBASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRABD2BA6NFA1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 MIR572-201ENST00000384983 95 ntBASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 AC012414.1-201ENST00000556676 535 ntBASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRABD2BA6NFA1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 KRT18P14-201ENST00000534205 1250 ntBASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 AL354811.1-201ENST00000610286 706 ntBASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.61■■□□□ 1.05
TRABD2BA6NFA1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 ERN1-208ENST00000606895 2068 ntBASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRABD2BA6NFA1 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TRABD2BA6NFA1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRABD2BA6NFA1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRABD2BA6NFA1 IGHV3-19-201ENST00000521488 291 ntBASIC21.58■■□□□ 1.05
TRABD2BA6NFA1 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
TRABD2BA6NFA1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TRABD2BA6NFA1 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.58■■□□□ 1.04
TRABD2BA6NFA1 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TRABD2BA6NFA1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.57■■□□□ 1.04
TRABD2BA6NFA1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms