Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.84■■□□□ 1.57
TRIM49BA6NDI0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM49BA6NDI0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM49BA6NDI0 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC24.84■■□□□ 1.57
TRIM49BA6NDI0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
TRIM49BA6NDI0 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 COMT-203ENST00000403184 2217 ntTSL 2 BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
TRIM49BA6NDI0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
TRIM49BA6NDI0 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 AC233723.2-201ENST00000623798 2106 ntBASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC24.82■■□□□ 1.56
TRIM49BA6NDI0 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.81■■□□□ 1.56
TRIM49BA6NDI0 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM49BA6NDI0 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
TRIM49BA6NDI0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM49BA6NDI0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.81■■□□□ 1.56
TRIM49BA6NDI0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 AC021242.3-201ENST00000607598 1377 ntBASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
TRIM49BA6NDI0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC24.79■■□□□ 1.56
TRIM49BA6NDI0 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.78■■□□□ 1.56
TRIM49BA6NDI0 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 RARRES2P1-201ENST00000474487 481 ntBASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
TRIM49BA6NDI0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 AL353803.4-201ENST00000565882 1934 ntBASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
TRIM49BA6NDI0 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
TRIM49BA6NDI0 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 BX664725.1-201ENST00000438252 379 ntBASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC24.74■■□□□ 1.55
TRIM49BA6NDI0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms