Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT1A5YKK6 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT1A5YKK6 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
CNOT1A5YKK6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT1A5YKK6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.83■■□□□ 1.09
CNOT1A5YKK6 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CNOT1A5YKK6 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CNOT1A5YKK6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CNOT1A5YKK6 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.83■■□□□ 1.08
CNOT1A5YKK6 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.83■■□□□ 1.08
CNOT1A5YKK6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
CNOT1A5YKK6 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.82■■□□□ 1.08
CNOT1A5YKK6 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CNOT1A5YKK6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.81■■□□□ 1.08
CNOT1A5YKK6 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
CNOT1A5YKK6 AL022069.1-201ENST00000568025 1636 ntBASIC21.79■■□□□ 1.08
CNOT1A5YKK6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 KRT19P1-201ENST00000405746 1186 ntBASIC21.79■■□□□ 1.08
CNOT1A5YKK6 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CNOT1A5YKK6 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT1A5YKK6 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CNOT1A5YKK6 TPRG1LP1-201ENST00000598702 760 ntBASIC21.78■■□□□ 1.08
CNOT1A5YKK6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CNOT1A5YKK6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.78■■□□□ 1.08
CNOT1A5YKK6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 AC087239.1-201ENST00000622671 572 ntBASIC21.77■■□□□ 1.08
CNOT1A5YKK6 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CNOT1A5YKK6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT1A5YKK6 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT1A5YKK6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT1A5YKK6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT1A5YKK6 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CNOT1A5YKK6 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.76■■□□□ 1.07
CNOT1A5YKK6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 LINC02228-203ENST00000641970 1355 ntBASIC21.75■■□□□ 1.07
CNOT1A5YKK6 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CNOT1A5YKK6 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 KRT18P11-201ENST00000435214 1283 ntBASIC21.74■■□□□ 1.07
CNOT1A5YKK6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 KRT18P6-201ENST00000555540 1265 ntBASIC21.74■■□□□ 1.07
CNOT1A5YKK6 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.74■■□□□ 1.07
CNOT1A5YKK6 AC073210.2-201ENST00000430369 194 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms