Protein–RNA interactions for Protein: A4FU49

SH3D21, SH3 domain-containing protein 21, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21A4FU49 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SH3D21A4FU49 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3D21A4FU49 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.79■□□□□ 0.92
SH3D21A4FU49 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.79■□□□□ 0.92
SH3D21A4FU49 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SH3D21A4FU49 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SH3D21A4FU49 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 AC127496.7-201ENST00000625110 1798 ntBASIC20.78■□□□□ 0.92
SH3D21A4FU49 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.78■□□□□ 0.92
SH3D21A4FU49 AC137630.3-201ENST00000607245 391 ntBASIC20.78■□□□□ 0.92
SH3D21A4FU49 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SH3D21A4FU49 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SH3D21A4FU49 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SH3D21A4FU49 AC019069.1-201ENST00000610008 1333 ntBASIC20.78■□□□□ 0.92
SH3D21A4FU49 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3D21A4FU49 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3D21A4FU49 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3D21A4FU49 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3D21A4FU49 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3D21A4FU49 KRT16P3-201ENST00000439127 1283 ntBASIC20.77■□□□□ 0.92
SH3D21A4FU49 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC20.77■□□□□ 0.92
SH3D21A4FU49 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3D21A4FU49 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SH3D21A4FU49 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.77■□□□□ 0.92
SH3D21A4FU49 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
SH3D21A4FU49 LINC00526-201ENST00000581067 1875 ntBASIC20.77■□□□□ 0.92
SH3D21A4FU49 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 AC008406.3-201ENST00000620001 1374 ntBASIC20.76■□□□□ 0.91
SH3D21A4FU49 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 UNC93B8-201ENST00000511903 705 ntBASIC20.76■□□□□ 0.91
SH3D21A4FU49 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SH3D21A4FU49 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SH3D21A4FU49 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3D21A4FU49 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3D21A4FU49 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3D21A4FU49 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3D21A4FU49 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SH3D21A4FU49 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SH3D21A4FU49 C1orf229-201ENST00000623686 2258 ntBASIC20.75■□□□□ 0.91
SH3D21A4FU49 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 TSPY9P-201ENST00000440215 945 ntBASIC20.74■□□□□ 0.91
SH3D21A4FU49 TSPY11P-201ENST00000442607 1045 ntBASIC20.74■□□□□ 0.91
SH3D21A4FU49 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3D21A4FU49 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3D21A4FU49 AC021242.3-201ENST00000607598 1377 ntBASIC20.73■□□□□ 0.91
SH3D21A4FU49 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3D21A4FU49 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3D21A4FU49 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3D21A4FU49 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3D21A4FU49 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3D21A4FU49 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3D21A4FU49 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms